KEGG   Chitinophaga caeni: COR50_14305
Entry
COR50_14305       CDS       T05360                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae  Chitinophaga caeni
Pathway
cbae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    COR50_14305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbae03021]
    COR50_14305
Transcription machinery [BR:cbae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     COR50_14305
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_40 HTH_24 PhyR_sigma-like HTH_5 HTH_10 HTH_36 HTH_11 HTH_Mga HTH_20 GerE DUF6362 HTH_17 ImpA_N HTH_30 HTH_IclR HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: ATL48239
UniProt: A0A291QW29
LinkDB
Position
complement(3379424..3379999)
AA seq 191 aa
MPGHLSEPLQDEQAFRTLYDEYAERVYQYANAFTRSPELAEDITQELFLILWRKRDDLHQ
VENMDGYIFRIARNLAIKLLKKAALDIQLSVELYRHAIKENNAIDEALGSKAVKDLLEKA
VLELPPQPRKIYLLSRKEFMNFDEIAEVTGLSRNTVKNHLQKALNEIRDYLVKHGYQISI
AALIVREFYLF
NT seq 576 nt   +upstreamnt  +downstreamnt
atgcccggccacctttccgaaccactgcaagatgaacaagcttttagaacgctgtatgat
gagtatgcagaaagggtgtaccaatatgcaaatgcctttacccgctcccccgagctagcc
gaagatattacgcaggagctctttctcatcctttggcggaaaagggatgatcttcaccag
gttgaaaatatggacggttatattttcaggatcgcccgcaatcttgctatcaagctactg
aaaaaagcagcgctggatatccagctttcggtagaattgtaccgccatgccataaaggaa
aataacgcgatagatgaagctttaggtagtaaagcagttaaagacttactcgaaaaagcc
gttttggaactgcctccgcaacccaggaaaatttacttgctcagccgcaaagaatttatg
aatttcgacgagatagctgaagtaaccggtttgtcaagaaataccgtgaaaaatcatttg
caaaaagcattgaatgaaatccgcgattacctggtaaaacatggttatcaaatcagtatt
gcggcattgatcgtccgcgaattttacttattctga

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