Chitinophaga caeni: COR50_14305
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Entry
COR50_14305 CDS
T05360
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae
Chitinophaga caeni
Pathway
cbae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COR50_14305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbae03021
]
COR50_14305
Transcription machinery [BR:
cbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COR50_14305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_40
HTH_24
PhyR_sigma-like
HTH_5
HTH_10
HTH_36
HTH_11
HTH_Mga
HTH_20
GerE
DUF6362
HTH_17
ImpA_N
HTH_30
HTH_IclR
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
ATL48239
UniProt:
A0A291QW29
LinkDB
All DBs
Position
complement(3379424..3379999)
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AA seq
191 aa
AA seq
DB search
MPGHLSEPLQDEQAFRTLYDEYAERVYQYANAFTRSPELAEDITQELFLILWRKRDDLHQ
VENMDGYIFRIARNLAIKLLKKAALDIQLSVELYRHAIKENNAIDEALGSKAVKDLLEKA
VLELPPQPRKIYLLSRKEFMNFDEIAEVTGLSRNTVKNHLQKALNEIRDYLVKHGYQISI
AALIVREFYLF
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcccggccacctttccgaaccactgcaagatgaacaagcttttagaacgctgtatgat
gagtatgcagaaagggtgtaccaatatgcaaatgcctttacccgctcccccgagctagcc
gaagatattacgcaggagctctttctcatcctttggcggaaaagggatgatcttcaccag
gttgaaaatatggacggttatattttcaggatcgcccgcaatcttgctatcaagctactg
aaaaaagcagcgctggatatccagctttcggtagaattgtaccgccatgccataaaggaa
aataacgcgatagatgaagctttaggtagtaaagcagttaaagacttactcgaaaaagcc
gttttggaactgcctccgcaacccaggaaaatttacttgctcagccgcaaagaatttatg
aatttcgacgagatagctgaagtaaccggtttgtcaagaaataccgtgaaaaatcatttg
caaaaagcattgaatgaaatccgcgattacctggtaaaacatggttatcaaatcagtatt
gcggcattgatcgtccgcgaattttacttattctga
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