Chitinophaga caeni: COR50_15390
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Entry
COR50_15390 CDS
T05360
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae
Chitinophaga caeni
Pathway
cbae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COR50_15390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbae03021
]
COR50_15390
Transcription machinery [BR:
cbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COR50_15390
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
TetR_C_8
HTH_23
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ATL48434
UniProt:
A0A291QX53
LinkDB
All DBs
Position
3672499..3673125
Genome browser
AA seq
208 aa
AA seq
DB search
MKVAAFITDQELLDSMKLDDEPAFARLFNRYWEPLCVAAAKRLGQVPDVQDIVQEIMKTV
WEKRHALHTNEDGSLEGYLFTLLKYAIIDTISRDSKMEVRKNVFQQFVSLQESSVFEGLI
TKELDAAIQEEISGMPQNMKKVILLSRSYNYSIPEIAIQLSLSEQTVKNLLSQALKRLKT
RVSHYYRHLPASHADTAFIIIGCSILGF
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtagctgcttttattacggatcaagaactgttggattccatgaaacttgatgat
gagccagcttttgcgcggttgttcaaccgttattgggaaccactttgtgttgcggcagcc
aagcgtttagggcaggttccagatgtgcaagacatcgtgcaggaaatcatgaaaaccgtt
tgggagaaaaggcatgctttgcatacaaatgaagatggctccctggaaggatatttattt
accttgttgaaatacgctattatagatacgattagcagggattccaagatggaagttcgc
aaaaatgtattccaacaatttgtgagtttgcaagaatcttccgtttttgaaggtctaatt
accaaggagctcgatgccgctatccaggaagaaatttcagggatgccgcagaatatgaaa
aaagttatcctactaagtagaagctataattattctatcccagaaattgcaatacagctt
tccttatcagaacaaactgtaaaaaacttacttagccaagctttaaaacgtttaaaaaca
agggttagtcactactaccggcacctcccggcatcccatgcagatactgcatttatcatt
atcggttgttccatcttgggattttag
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