Chitinophaga caeni: COR50_16425
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Entry
COR50_16425 CDS
T05360
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbae
Chitinophaga caeni
Pathway
cbae03030
DNA replication
cbae03430
Mismatch repair
cbae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COR50_16425
03430 Mismatch repair
COR50_16425
03440 Homologous recombination
COR50_16425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbae03032
]
COR50_16425
03400 DNA repair and recombination proteins [BR:
cbae03400
]
COR50_16425
Enzymes [BR:
cbae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COR50_16425
DNA replication proteins [BR:
cbae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COR50_16425
DNA repair and recombination proteins [BR:
cbae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COR50_16425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
GIY_YIG_2
GF_recep_IV
Motif
Other DBs
NCBI-ProteinID:
ATL48621
UniProt:
A0A291QXH5
LinkDB
All DBs
Position
complement(3920851..3922218)
Genome browser
AA seq
455 aa
AA seq
DB search
MYAIVDIETTGGHASASGITEIAIFIHDGEKVVQTFHSLVDPGMPVPRHIQALTGITDEM
LEQAPQFKDIAKDIFEILEGNIFVAHHVNFDYSFVKHELERAGYSWQSKKLCTVRLSRKV
FPGFPSYSLGNLCRQLEIPIENRHRAGGDAAATVLLFEKILSNDTNGAIELALKAGSREQ
VLPANLPAAYLLDLPAVPGVYYFHNEKDKVIYVGKAVNIKKRVQSHFVGTNIGPQRQGFL
RNIYKITYQVTATELMAFILESIEIKRLWPEYNRAQKRVEAKYGLYCFEDQQGYLRLALE
RKRKHMKQILGCNLYIEGRNRLIQLVKQFNLCHKLCYLQSDLQPCSGRKEQTCEGACEKL
ESPGSYNKKVLDAIAFVESGLQSYIILDQGIRLDHKSCILVEKGSFYGMGYIPKEDALDD
IETVKSQLIQYPDSEYIMHLIQQYANLHTNQVIQY
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaatagtcgatatagaaaccacgggagggcatgccagcgctagcggcatcact
gaaatagccatttttattcacgatggggagaaggtggtacaaacattccacagtttggta
gatccaggtatgccggtaccaaggcatattcaagctttaacagggatcacggatgagatg
ttggaacaagcgccccaattcaaggatattgccaaggatatttttgaaatattggaaggt
aacatattcgtagcgcatcatgtgaacttcgattattctttcgtgaaacacgagttggaa
agggcgggctattcctggcaatctaaaaagctctgtaccgttaggttgagcagaaaagtg
ttcccggggtttccttcatatagcttgggaaatttatgcaggcaattggaaatacccatt
gaaaatcggcatagggcaggtggagatgctgcggctacggtacttttgttcgagaaaata
ttgtccaacgatacgaatggcgctatagaacttgcacttaaagcaggtagccgtgaacag
gtattacccgccaatttacccgctgcttacttactggatttacctgccgttcccggtgta
tactattttcataatgaaaaggataaggttatttatgttggtaaagcggtaaacataaag
aaaagggttcaaagtcatttcgttggaactaacatcggcccgcagcggcaaggttttttg
cggaatatttataagattacttaccaagttacggctactgaattgatggcctttatcttg
gaatctatcgagataaaacgcttatggccagaatataaccgggctcaaaagagggtggag
gccaagtacggtttgtattgtttcgaagatcaacaaggctatttaaggctagccttggaa
aggaagcgcaaacatatgaaacaaatcctcggttgcaacctttacattgaaggtagaaac
cggttgattcaattagtaaagcagtttaacctttgccacaaattatgctatttacaatcc
gatttgcaaccttgctccggcagaaaggagcaaacctgcgaaggcgcttgtgaaaaattg
gaatccccgggatcttacaataaaaaagtactggatgcaattgcctttgtagaatcgggt
ttgcaatcatacataatactagatcaaggcatcaggttagatcataaaagctgcatccta
gttgaaaagggaagtttttacggtatgggctatatccctaaagaagatgctttagatgat
atcgaaacggttaaatcccaacttatccaatacccggattctgaatatatcatgcatcta
atccagcaatatgcgaacctgcataccaaccaggtcatccaatattaa
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