KEGG   Chitinophaga caeni: COR50_17695
Entry
COR50_17695       CDS       T05360                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae  Chitinophaga caeni
Pathway
cbae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    COR50_17695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbae03021]
    COR50_17695
Transcription machinery [BR:cbae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     COR50_17695
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_40 HTH_10 DUF8612 PhyR_sigma-like GerE DUF4835 HTH_11 PhyR_sigma2 HTH_Mga DUF722 DUF134 HTH_23 Zf-C2H2_ZNF451_2nd
Other DBs
NCBI-ProteinID: ATL48849
UniProt: A0A291QXU2
LinkDB
Position
complement(4207794..4208396)
AA seq 200 aa
MPMLKIPHNEKKLLFRLSAGDPGAFRTVFETYWDHVYGAALALVKSPAVAEDIAQDIFTQ
LWERRANLPGIQNFKAYLYTLAKNRILDRFRHLSTQQQYRKHIYNYMNECDTERVDELAE
ARDIQRILENAIQSLPPQQQRAFKLSRFNGLNHDEIAQAMGVSKVTIKSYIVQAISTLRK
VLAKQPVPFWLPLFLLQKFL
NT seq 603 nt   +upstreamnt  +downstreamnt
atgccgatgctgaaaattccacataatgaaaagaaattgctctttcgcctatcagcaggc
gatccgggggcatttcgtaccgttttcgaaacctattgggatcatgtgtacggcgcggct
ttggccttggtaaaatcgccggcagtggcagaggatatcgcgcaggatattttcacacaa
ttgtgggaacggagagctaacctcccgggcatacaaaacttcaaagcatatttatatacc
ctggctaaaaacaggatattggatcgtttccgccacctatctacacaacaacaataccgc
aagcatatttataattatatgaacgaatgcgatacggagcgggtagatgaactagctgaa
gcgcgggatatacagcggatattggaaaatgcaattcaatctttacccccgcagcagcag
cgggcctttaaactgagccgtttcaatggcctcaatcatgatgaaatagcccaggcgatg
ggtgtttccaaggtcacgataaaaagctatatcgtccaggcgatctccacgttaagaaag
gtattagccaagcagcctgttccattttggttgccattattcctcttgcaaaaattttta
taa

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