Chitinophaga caeni: COR50_17695
Help
Entry
COR50_17695 CDS
T05360
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae
Chitinophaga caeni
Pathway
cbae02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COR50_17695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbae03021
]
COR50_17695
Transcription machinery [BR:
cbae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COR50_17695
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_40
HTH_10
DUF8612
PhyR_sigma-like
GerE
DUF4835
HTH_11
PhyR_sigma2
HTH_Mga
DUF722
DUF134
HTH_23
Zf-C2H2_ZNF451_2nd
Motif
Other DBs
NCBI-ProteinID:
ATL48849
UniProt:
A0A291QXU2
LinkDB
All DBs
Position
complement(4207794..4208396)
Genome browser
AA seq
200 aa
AA seq
DB search
MPMLKIPHNEKKLLFRLSAGDPGAFRTVFETYWDHVYGAALALVKSPAVAEDIAQDIFTQ
LWERRANLPGIQNFKAYLYTLAKNRILDRFRHLSTQQQYRKHIYNYMNECDTERVDELAE
ARDIQRILENAIQSLPPQQQRAFKLSRFNGLNHDEIAQAMGVSKVTIKSYIVQAISTLRK
VLAKQPVPFWLPLFLLQKFL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgctgaaaattccacataatgaaaagaaattgctctttcgcctatcagcaggc
gatccgggggcatttcgtaccgttttcgaaacctattgggatcatgtgtacggcgcggct
ttggccttggtaaaatcgccggcagtggcagaggatatcgcgcaggatattttcacacaa
ttgtgggaacggagagctaacctcccgggcatacaaaacttcaaagcatatttatatacc
ctggctaaaaacaggatattggatcgtttccgccacctatctacacaacaacaataccgc
aagcatatttataattatatgaacgaatgcgatacggagcgggtagatgaactagctgaa
gcgcgggatatacagcggatattggaaaatgcaattcaatctttacccccgcagcagcag
cgggcctttaaactgagccgtttcaatggcctcaatcatgatgaaatagcccaggcgatg
ggtgtttccaaggtcacgataaaaagctatatcgtccaggcgatctccacgttaagaaag
gtattagccaagcagcctgttccattttggttgccattattcctcttgcaaaaattttta
taa
DBGET
integrated database retrieval system