Chitinophaga caeni: COR50_19470
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Entry
COR50_19470 CDS
T05360
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbae02000
]
COR50_19470
Transporters [BR:
cbae02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
COR50_19470
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ATL49178
UniProt:
A0A291QZ07
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All DBs
Position
complement(4659990..4661882)
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AA seq
630 aa
AA seq
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MRFYKYIVGFSLSLLITSSCSNILDIDPTDKIKAEDLFSDPKGVEQYMANLYYQLPIEDF
AYFRNGFNTNGQDPNNGGFAAAMVTDEAVHSDFGDFFGDGDFGWWEPGYKLIRDVNLLSD
VIPDLDITSQDRARLQGESAFLKAFAYFGLAKRYGGVPLIKESQQYSSNPDDLKVPRSTE
KETWDYILQLCDEAISNLGEEKGRRANKWTAYALKSRAALHAASLAKFGSRAPMSGVAVS
QGLVGLNAGDANAYYQQCIEASIAVINSGKFNLYKPNPSSPAEAAENYRQMFQDPNIIAD
DEAIMIKGYTLQGNFLGHNYDIWYQPAQVANGWPHPGRMNPSLDFVDIYENYNNPGHDAP
IITTVDGNITDYNGYTPSRDYLAYNHPYDIFDGKDARLWGTAILPGTEWKGIPIIIQAGY
IKPGGQVVIRTTDQVTVDGQTYYSYGAAGPSQYSGFDTYGGNNTRSGFSFKKFMNQNQPI
QAGWNNSTTDFVEFRYAEILLNYAEAVVESGLGDASLAATYMNATRRRAAHTVDIPLTVE
NVQRERRVELSFENKRFWDLIRRREYHTQFNNRMMHALMPIRDLRALPEEKYIFLRVNVQ
NTNPKTFQTKAYYRPIPGVASNGAIQNPEY
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgagattttataaatatatagttggcttttccttgagtttgcttattactagtagttgt
agcaatatcttggatattgatccgaccgacaaaattaaagcggaagatttatttagcgat
cccaagggtgtggagcagtatatggcaaacctatactatcaattgccgatagaagacttt
gcttactttcgaaacggcttcaatactaacggtcaagatcccaacaacggcgggtttgct
gccgcgatggttaccgatgaagcagtgcattccgatttcggtgatttttttggagatgga
gatttcggttggtgggaacccggttataaattaatccgggatgtgaatttattatccgat
gtaatacctgacctggatattacttcgcaagaccgcgcccggttacaaggggaaagcgct
ttcctaaaagctttcgcttacttcggtttagccaagcgctacggtggtgtaccattgatc
aaggaatcacagcaatattcttctaacccggacgatttaaaagtgcccaggagcaccgag
aaagaaacctgggattatattttgcaattatgtgatgaagccatcagcaacctgggtgaa
gaaaagggtaggagggctaataaatggactgcctacgcattaaaatcaagagctgcttta
cacgcggcatccttagctaaattcggtagccgcgcgcccatgtcgggtgtcgctgttagc
caaggtttagttggtcttaatgccggcgatgcgaacgcttattaccagcagtgtatcgaa
gcttcgatcgcggttataaattccggtaaatttaatctttacaaacccaatccttccagc
cccgcagaagctgccgagaattacaggcaaatgtttcaagatccgaatatcatcgcggat
gacgaagctatcatgataaagggttataccttgcaagggaatttcttgggtcacaactat
gatatatggtatcaaccagcgcaggttgcaaacggatggccgcatccgggcaggatgaac
ccttcattggattttgtggatatttatgaaaattataataaccccgggcacgatgccccg
atcataactaccgttgatggtaatattaccgattacaacgggtatactccatcaagagat
tatttagcgtataaccacccttacgatatcttcgatggcaaagatgccaggctatggggc
acagccatcttaccgggtactgaatggaaaggtataccgattattatccaggccggttat
atcaaaccgggcgggcaagtggtaattcgtaccacggaccaggttactgtagatggacaa
acatattatagttatggcgccgcgggaccaagtcaatattcaggcttcgatacttacggg
ggaaataatacccgtagcggtttttcatttaagaaatttatgaatcaaaaccaaccgatt
caagccgggtggaataatagcactaccgattttgtagaattccgttatgccgagatctta
ctgaattatgcagaagctgttgttgaaagcggtttgggggatgcttccttggctgcaact
tatatgaacgccacacgcagaagggccgcacataccgtagacatcccgttaacagttgag
aacgtacaaagggaaaggagggttgaattgtcattcgagaacaagaggttctgggatttg
atcaggcgccgggaataccatacccaattcaataaccgcatgatgcatgccttgatgcct
atcagggatcttagggctctcccggaagaaaaatacatcttcttaagggtaaatgtacag
aacacgaatcctaaaacctttcaaacgaaagcatattacaggcctattccgggtgttgct
tcaaatggcgccattcagaacccggaatactag
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