KEGG   Chitinophaga caeni: COR50_20025
Entry
COR50_20025       CDS       T05360                                 
Name
(GenBank) hypothetical protein
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
cbae  Chitinophaga caeni
Pathway
cbae02020  Two-component system
Brite
KEGG Orthology (KO) [BR:cbae00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    COR50_20025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbae03021]
    COR50_20025
Transcription machinery [BR:cbae03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     COR50_20025
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_11 Sigma70_ECF HTH_23 HTH_30 GerE HTH_DeoR HTH_Tnp_4 UPF0122 HTH_Mga HU-CCDC81_euk_2 DUF722 HTH_24 HTH_Tnp_ISL3 HTH_10 Xre-like-HTH NirdL-like_HTH HTH_Crp_2 HTH_20 HTH_29
Other DBs
NCBI-ProteinID: ATL49277
UniProt: A0A291QZA4
LinkDB
Position
complement(4817256..4817867)
AA seq 203 aa
MQVTYHNLTDDALLVFVKDDNIEAFTTIYNRYWERLLTFVIRAIKEQSDAEDIVQEIFIS
LWNRRKVIAIKTSFSTYIFNCARYMSIRYIEKNINRGHYLEYLADFMLSMQDGAAPENVL
NLKETGHQLESAIAQLPGRMQHVFRLSREYNLSYQEIANQLDISEETVRKQIHRALKLLR
VQLRHISITILVIIAQISIQNFF
NT seq 612 nt   +upstreamnt  +downstreamnt
atgcaggtaacttatcataatctgaccgatgatgcactgctcgtcttcgtgaaagacgac
aatatagaagcatttactaccatttataataggtattgggagcggctattgacatttgtt
atacgtgcgattaaggagcagtctgatgcggaagatatcgtgcaggaaatttttatttcg
ctgtggaaccgcaggaaggtcattgctataaaaacaagtttctccacttatatatttaat
tgcgcccgttatatgtctatcaggtatatcgagaagaatatcaaccgtggacattacctc
gaatacttggcggattttatgcttagcatgcaggatggcgccgcaccggaaaatgttttg
aacctgaaggaaaccggtcatcaactggaatcagcaattgcacagctgccgggcaggatg
caacatgtattccgcctgagtagggaatacaatttaagttaccaggaaattgctaaccag
ctggatatatccgaagagacggtaagaaagcaaatacatcgtgccttaaaattactgcgg
gtacaattacgtcatatctctattactatcctggtaattatcgcccaaatatccattcaa
aattttttttag

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