Chitinophaga caeni: COR50_21275
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Entry
COR50_21275 CDS
T05360
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbae
Chitinophaga caeni
Brite
KEGG Orthology (KO) [BR:
cbae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbae03032
]
COR50_21275
03400 DNA repair and recombination proteins [BR:
cbae03400
]
COR50_21275
Enzymes [BR:
cbae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
COR50_21275
DNA replication proteins [BR:
cbae03032
]
Prokaryotic type
DNA Topoisomerases
COR50_21275
DNA repair and recombination proteins [BR:
cbae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
COR50_21275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
FGase
Motif
Other DBs
NCBI-ProteinID:
ATL49504
UniProt:
A0A291R079
LinkDB
All DBs
Position
5069237..5071585
Genome browser
AA seq
782 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKILGTDFEVTSCFGHIRDLEKDDMGVDIQDNFRPKYIIPEDK
EKVVKDLKKMAKGSEEVWLATDEDREGEAISWHLSEVLGLDPASTKRIVFHEITKPAIEK
AVKTPRLLDMNLVNAQQARRILDRIVGFELSPVLWRKMSMRNSLSAGRVQSVAVRLIVER
EREINQFTPTSSFKVDAYFTAKDTSGKSVTFKAEGPTKFKSAEDAEKFLQSCIGAEYTVR
DIQVKPAKKSPAAPFTTSTLQQEASRKLGYSVSKTMLLAQKLYESGNITYMRTDSVNLSE
TAMNDIQKAITGSYGDKYYQARKYKNKNDAAQEAHEAIRPTYMENSSIDDSDTKRLYDLI
WKRTIASQMSDAELEKTIAKINISTNNEDLTASGEVLKFDGFLKVYLEGKDEDEDEEEKE
GVLPPLSLKQVLGFKEMHATERFSRPPARYTEASLVKKLEELGIGRPSTYAPTITTVQKR
NYVEKRDREGVKREYRILHLQNDQVSKETATENTGAEKAKLFPTDLGLVVTDFLNQYFDS
VMDYGFTAKIENEFDEIAHGKKQWSKMLNEFYKPFHKDIEDTLENAERVKGEHLLGTDPE
SGKPVVARMGRYGPMIQIGSVEDEEKPRFARLKADQSIETINLEEAMELFKLPRILGEFE
GTEVTVNIGRFGPYAQHDKKFYSLKKEMDPYTVGLDEIAPLIVEKRAAKAERTIKVFEKE
KIQILKGPYGPYIKQGLRNFKIPKEKIDTAADLTLEDAKAIIEEVKANPPKKKAASRKKK
SD
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctcgtaatcgttgagtccccagccaaggctaagaccattgaaaaaatt
ttaggtactgatttcgaagtcacttcctgcttcggtcacatccgtgacttggagaaggat
gatatgggtgtcgatatccaggacaatttcagacctaaatatataataccggaagataaa
gaaaaggttgtaaaggatctgaaaaagatggctaaaggctccgaagaggtttggttagca
acggatgaggaccgcgagggagaggctatttcttggcatttaagcgaagttttaggctta
gatcccgcctcgaccaaaaggatcgttttccatgaaataactaagcctgccatcgaaaaa
gccgtaaaaacgccccgtttgcttgatatgaacctggtaaatgcccagcaagcccgccgg
atcctggataggatcgtaggttttgagctatcgccggtactttggaggaaaatgagtatg
cgcaattcgctatctgccgggcgcgtacaaagtgtagccgttcggttgatcgtggaaagg
gaaagggaaatcaaccagttcacacctaccagcagctttaaagttgatgcttattttact
gcaaaggatacgagcggtaagtccgtaactttcaaagcagaaggtcctaccaagtttaaa
tctgccgaagatgcagaaaaattcctgcaaagctgcatcggcgctgaatataccgtgagg
gatatacaggtgaaaccggctaaaaagtcgcctgccgccccttttaccacttctaccttg
cagcaggaagctagccgcaagctcggttacagcgtgtctaaaacgatgctgctagcgcag
aaactgtatgaaagcggtaatattacttatatgaggacagattccgtgaatctctccgaa
actgccatgaatgacattcaaaaggcaattacgggcagctatggcgataaatattaccaa
gcccgtaaatacaagaacaaaaatgatgcggcacaggaagcacacgaagctatccgtcct
acttatatggaaaatagcagtatcgatgatagtgataccaagcgtctctatgacctgatc
tggaaaagaacgatcgccagccaaatgagcgatgccgaactggagaaaaccatcgccaaa
ataaatatttctaccaataacgaagatcttaccgctagcggggaagtactgaaatttgac
ggcttcctgaaagtgtatcttgaaggtaaagatgaagatgaggacgaggaggagaaagaa
ggggtattaccgccattaagcttgaaacaggtgctgggctttaaagaaatgcacgcgact
gaaagatttagtcgcccaccggcaagatatacggaggccagccttgtaaaaaaactggag
gaactgggtatcggtaggccatctacttacgcgccgacgatcactaccgtgcagaaaaga
aattatgtcgagaaaagggatcgcgaaggcgttaaaagggaatatagaattttgcacctt
caaaatgaccaggtgagtaaagaaaccgccactgaaaatacgggtgcggaaaaagccaaa
cttttcccgaccgatcttggtctagtggtaaccgatttcttaaaccagtatttcgactcc
gtgatggattacggcttcaccgccaagatcgaaaacgagttcgacgagatagcccacggt
aaaaaacaatggagcaagatgctgaacgagttctacaaaccgttccataaagacattgaa
gataccttggaaaatgctgaaagggtgaaaggtgaacacctgctgggaaccgatcccgaa
tcaggcaaacctgttgtggccaggatgggacgatatggcccgatgatccagatcggctcc
gtagaggatgaagaaaaaccacgttttgcacgccttaaagccgatcaaagtatcgagacg
atcaacttggaggaagcgatggaattgttcaaattaccgaggattcttggcgaatttgaa
ggaacagaagtgacggtgaatatcggtaggttcggtccttatgcacaacatgataagaaa
ttctattccttgaagaaagaaatggatccttatacggtggggctagatgaaatagcgcca
ttgatcgttgaaaagcgtgccgcgaaagcagaaagaaccatcaaggtttttgagaaggaa
aaaatacagattttaaaaggcccatacggcccttatataaaacaaggtttgaggaatttc
aaaattccgaaagagaaaattgacacggcggcagatcttaccctcgaagatgcgaaagcg
attatcgaggaagtaaaagcgaacccgcccaagaagaaagcggctagccgcaagaaaaaa
tcagactag
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