| Entry |
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| Name |
(GenBank) PD-(D/E)XK nuclease family protein
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| KO |
| K16899 | ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] |
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| Organism |
cbaf Clostridiales bacterium FE2010
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| Brite |
KEGG Orthology (KO) [BR:cbaf00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cbaf03400]
JS518_01580
Enzymes [BR:cbaf01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JS518_01580
DNA repair and recombination proteins [BR:cbaf03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JS518_01580
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
324759..328070
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| AA seq |
1103 aa
MSRVKIIGDRNGRVWPLVLRDAAENRKAGRRLILYVPEQYTLQAERDIITGLKLPGLLDI
QVISPRKLKQQVKEQTGTGTRRPLNEMGRAMAVHRVMTEQEENLAYYRNMTELSGAVSRV
SGALDELRESDITPEELEDYAAGTGTGAERAKLNDLKILWDGYETLISEQFDEEKAIWTD
AVSRLENSGLWNGADVAVYGFDAIRPDLRELIAHLCNKVNSLSVYLIMDEKQAPDGRIFT
QQHESTDQLIKALEEVRTLTEEVYPHSIREGCAPALQFLDRNLFALNPETWTGNTEGVLK
LYAGSSPWDEAEAVAATLREWHEEGIPWNRMAIALPPGAGSEGILRANLKISGIPFVWQQ
KDKAVNHPVCRMLLSTLSILSDGYRTDKVITVARSGFCTLTEAEGLCLEDYARAHGIEGR
RWQRPFTGGENAEEAEQLRQRLLQPVEELRTNLKEARNAAASAEALVGFLEAENVWNRLQ
EEEEMLLQHEMYREAIINRQIWKLLMELLDQLGTLLGARRAAIRDLRYMLESALNPVSLA
ALPEQEDGVIIGETGHLLAGDIQALILPQAQDGMLTAPESGWLTDAERKKMEEATGKTIG
ISREAGCLIRKYDFYRTLTLPREKLMISWSLRSEEGGALQPDGLIAQIRELYPNIHEEGG
MLGQENRKDPATPREALEGVGDWLTELKDGMIPEIPPAWRTALVQLLHNGTYGKAARRLL
EEMLPQEEEQKLEKDTARKLFMTDRLSISRLEQFASCPYRHFIDYGLRPVKQEEFTYESN
DAGTFFHEALDRYMKQVGAEKDWPYFTAERVDNVMDTILTELTEEWKETPLREDAMGEWT
GEGYLRRVRRAAQVLTRFAANSEFRTIATEQPFGEGEGLPPVIITLADGSKTAIRGQIDR
IDTYENGEGVWLRVVDNKSRGKKPDPAKMETGEQLQLMIYLKAAADSMPGTRPAGAMFFP
IEDKEVSTEDDNPEKIENDRISEVRMKGLITAEEDLIRAMDRDVHPFSVDKVFNKDGTIS
KSASWAVEEKTLSGLMDAAVEKAGELCGRMRDGDIAAMPGEDSLGPVCRYCDYKAICRNG
GRETRKLNTGITYQDIAGKNTLR |
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| NT seq |
3312 nt +upstreamnt +downstreamnt
atgagcagggtaaagatcatcggagacagaaacgggcgagtctggccgctggtgctccgt
gacgcggcggaaaaccgaaaagccggacgaaggctgattctgtatgtgcccgagcagtat
accctgcaggcggagagggatatcattaccggactgaaactgccgggactgctggacatc
caggtaatcagtccgcgaaaactgaagcagcaggtcaaagaacagacgggcacgggaaca
agacgcccgctgaatgaaatgggccgggcaatggcggttcaccgggtgatgacagagcag
gaagaaaacctggcatattaccggaacatgacggagttgtccggcgcggtgagccgcgtc
agcggggcgctggatgaattgcgggaaagcgacattacgccggaggaactggaagattat
gcagcaggcacgggaaccggcgcggaacgggccaaactcaatgacctgaaaatcctctgg
gatggatatgagacactgatctcagaacagtttgatgaagaaaaagccatctggaccgat
gctgtaagccggctggaaaacagcggattatggaacggcgcagacgtggcagtatatggt
tttgacgcgatccggccggacctgagggagctgattgcccacctgtgcaacaaggtgaac
agcctgtcggtttacctgatcatggatgaaaagcaggctccggacgggcggatctttaca
cagcagcatgaaagcacagaccagctgatcaaagccctggaggaagtcaggacccttacc
gaggaagtttatccgcacagcatacgggaaggctgcgcaccggccctgcagttcctggac
cggaatctgtttgcactgaatccggaaacctggacgggaaatacagaaggcgtgctgaaa
ttgtatgccggaagctctccgtgggatgaggcggaagctgtcgcggctacattgcgggaa
tggcatgaggaaggtatcccctggaaccggatggcgattgcccttccacctggagctggc
tcggaaggcatcctgagagcgaacttgaagatcagcggtataccctttgtatggcagcaa
aaggataaagcagtgaaccatcccgtatgccgtatgctgctcagcacgctgtccatcctg
agcgacggctaccgcacagacaaggttattacagtggcacggagcggcttctgcacgctg
acggaagcggaaggcctgtgcctggaagattatgcccgggcgcacggcattgaaggacga
agatggcagcggccctttacaggcggggagaacgcggaggaagcagaacagctccggcag
cggctgctgcagcctgtggaggaactgcgcacgaacctgaaggaggccaggaacgcggcg
gcgtccgcggaggcgctggtcgggttcctggaagcggaaaacgtatggaacaggctgcag
gaagaggaagaaatgctcctgcagcatgaaatgtacagggaagcgattatcaaccggcag
atctggaagctgctgatggagcttctggatcagcttggtacgcttctgggcgcgcggcgc
gcggcgatccgggacctgcggtatatgctggaaagcgcgctgaatccggtgtcgcttgcg
gcactgcctgaacaggaagacggtgtaatcatcggcgagacaggacatctgctggccgga
gatatccaggcactgattcttccgcaggcgcaggacggcatgctgacagcgccggagagc
ggctggctgacggatgccgaacggaaaaagatggaggaagccaccggaaaaacgatcggt
atcagccgggaagccgggtgcctgatccggaaatatgacttttaccgtaccctgacgctg
ccgcgggaaaagctgatgattagctggagcctgcgctcagaggaaggcggcgcgctgcag
ccggacggactgattgcccagatcagggaactgtatccgaatatccacgaagaaggcgga
atgctgggccaggagaaccggaaagatcccgcgacgccacgggaagcgttggagggcgtg
ggggactggctgacagaactgaaggacggcatgataccggaaataccgccggcatggaga
accgcgctggttcagctgctgcacaacggaacatacggaaaggcggcgcgccggctcctg
gaggaaatgctgccacaggaagaagaacaaaagctggagaaggatacggccaggaagctg
ttcatgacagacaggctgtccatcagccggttggagcagtttgcttcctgtccgtacagg
cattttatcgattacggcctgcgaccggtgaaacaggaagaattcacctacgagagcaac
gacgcgggaactttctttcacgaggcgctggaccggtatatgaagcaggtcggcgctgaa
aaggactggccgtatttcacggcggaacgggtcgacaacgtcatggacactatcctgacg
gagctcacagaggagtggaaggagacgccgcttcgggaagacgccatgggagagtggacg
ggcgagggctacctgcgccgtgtccgccgggcggcgcaggtactgacacggtttgccgcc
aacagcgaattccggacgattgcgacggagcagcccttcggtgaaggtgagggccttccg
ccggtgatcatcacgctggcggacggaagcaaaacggcgatccggggacagattgaccgg
attgacacctatgagaacggcgaaggcgtctggctgcgggtggtggacaacaagagcagg
ggaaagaagccggatcccgcaaaaatggaaaccggagaacagctgcagctgatgatttac
ctgaaggctgcggctgacagcatgccgggtacccggccggccggagccatgttcttcccc
attgaggataaagaagtatcgacggaagatgacaatccggaaaagattgagaacgacagg
atcagcgaagtccgtatgaagggcctgattacggcggaggaagacctgatccgggcgatg
gaccgggacgtgcatccgttctctgtggacaaggtgttcaacaaggatggaaccatcagc
aaatctgcatcctgggctgtggaagaaaagacgctcagcggactgatggacgcggcggtt
gaaaaagcgggagaactctgtgggcggatgcgcgacggagacatcgccgcaatgcccggt
gaagattcccttggcccggtgtgccggtactgtgattacaaagcaatctgccgcaacggc
ggcagggaaacacgcaagctgaacaccgggataacttatcaggatatcgccgggaaaaac
acgttgcgctaa |
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