Clostridiales bacterium FE2010: JS518_01580
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Entry
JS518_01580 CDS
T08976
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cbaf
Clostridiales bacterium FE2010
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_01580
Enzymes [BR:
cbaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JS518_01580
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JS518_01580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
Motif
Other DBs
NCBI-ProteinID:
QTE74615
LinkDB
All DBs
Position
324759..328070
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AA seq
1103 aa
AA seq
DB search
MSRVKIIGDRNGRVWPLVLRDAAENRKAGRRLILYVPEQYTLQAERDIITGLKLPGLLDI
QVISPRKLKQQVKEQTGTGTRRPLNEMGRAMAVHRVMTEQEENLAYYRNMTELSGAVSRV
SGALDELRESDITPEELEDYAAGTGTGAERAKLNDLKILWDGYETLISEQFDEEKAIWTD
AVSRLENSGLWNGADVAVYGFDAIRPDLRELIAHLCNKVNSLSVYLIMDEKQAPDGRIFT
QQHESTDQLIKALEEVRTLTEEVYPHSIREGCAPALQFLDRNLFALNPETWTGNTEGVLK
LYAGSSPWDEAEAVAATLREWHEEGIPWNRMAIALPPGAGSEGILRANLKISGIPFVWQQ
KDKAVNHPVCRMLLSTLSILSDGYRTDKVITVARSGFCTLTEAEGLCLEDYARAHGIEGR
RWQRPFTGGENAEEAEQLRQRLLQPVEELRTNLKEARNAAASAEALVGFLEAENVWNRLQ
EEEEMLLQHEMYREAIINRQIWKLLMELLDQLGTLLGARRAAIRDLRYMLESALNPVSLA
ALPEQEDGVIIGETGHLLAGDIQALILPQAQDGMLTAPESGWLTDAERKKMEEATGKTIG
ISREAGCLIRKYDFYRTLTLPREKLMISWSLRSEEGGALQPDGLIAQIRELYPNIHEEGG
MLGQENRKDPATPREALEGVGDWLTELKDGMIPEIPPAWRTALVQLLHNGTYGKAARRLL
EEMLPQEEEQKLEKDTARKLFMTDRLSISRLEQFASCPYRHFIDYGLRPVKQEEFTYESN
DAGTFFHEALDRYMKQVGAEKDWPYFTAERVDNVMDTILTELTEEWKETPLREDAMGEWT
GEGYLRRVRRAAQVLTRFAANSEFRTIATEQPFGEGEGLPPVIITLADGSKTAIRGQIDR
IDTYENGEGVWLRVVDNKSRGKKPDPAKMETGEQLQLMIYLKAAADSMPGTRPAGAMFFP
IEDKEVSTEDDNPEKIENDRISEVRMKGLITAEEDLIRAMDRDVHPFSVDKVFNKDGTIS
KSASWAVEEKTLSGLMDAAVEKAGELCGRMRDGDIAAMPGEDSLGPVCRYCDYKAICRNG
GRETRKLNTGITYQDIAGKNTLR
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgagcagggtaaagatcatcggagacagaaacgggcgagtctggccgctggtgctccgt
gacgcggcggaaaaccgaaaagccggacgaaggctgattctgtatgtgcccgagcagtat
accctgcaggcggagagggatatcattaccggactgaaactgccgggactgctggacatc
caggtaatcagtccgcgaaaactgaagcagcaggtcaaagaacagacgggcacgggaaca
agacgcccgctgaatgaaatgggccgggcaatggcggttcaccgggtgatgacagagcag
gaagaaaacctggcatattaccggaacatgacggagttgtccggcgcggtgagccgcgtc
agcggggcgctggatgaattgcgggaaagcgacattacgccggaggaactggaagattat
gcagcaggcacgggaaccggcgcggaacgggccaaactcaatgacctgaaaatcctctgg
gatggatatgagacactgatctcagaacagtttgatgaagaaaaagccatctggaccgat
gctgtaagccggctggaaaacagcggattatggaacggcgcagacgtggcagtatatggt
tttgacgcgatccggccggacctgagggagctgattgcccacctgtgcaacaaggtgaac
agcctgtcggtttacctgatcatggatgaaaagcaggctccggacgggcggatctttaca
cagcagcatgaaagcacagaccagctgatcaaagccctggaggaagtcaggacccttacc
gaggaagtttatccgcacagcatacgggaaggctgcgcaccggccctgcagttcctggac
cggaatctgtttgcactgaatccggaaacctggacgggaaatacagaaggcgtgctgaaa
ttgtatgccggaagctctccgtgggatgaggcggaagctgtcgcggctacattgcgggaa
tggcatgaggaaggtatcccctggaaccggatggcgattgcccttccacctggagctggc
tcggaaggcatcctgagagcgaacttgaagatcagcggtataccctttgtatggcagcaa
aaggataaagcagtgaaccatcccgtatgccgtatgctgctcagcacgctgtccatcctg
agcgacggctaccgcacagacaaggttattacagtggcacggagcggcttctgcacgctg
acggaagcggaaggcctgtgcctggaagattatgcccgggcgcacggcattgaaggacga
agatggcagcggccctttacaggcggggagaacgcggaggaagcagaacagctccggcag
cggctgctgcagcctgtggaggaactgcgcacgaacctgaaggaggccaggaacgcggcg
gcgtccgcggaggcgctggtcgggttcctggaagcggaaaacgtatggaacaggctgcag
gaagaggaagaaatgctcctgcagcatgaaatgtacagggaagcgattatcaaccggcag
atctggaagctgctgatggagcttctggatcagcttggtacgcttctgggcgcgcggcgc
gcggcgatccgggacctgcggtatatgctggaaagcgcgctgaatccggtgtcgcttgcg
gcactgcctgaacaggaagacggtgtaatcatcggcgagacaggacatctgctggccgga
gatatccaggcactgattcttccgcaggcgcaggacggcatgctgacagcgccggagagc
ggctggctgacggatgccgaacggaaaaagatggaggaagccaccggaaaaacgatcggt
atcagccgggaagccgggtgcctgatccggaaatatgacttttaccgtaccctgacgctg
ccgcgggaaaagctgatgattagctggagcctgcgctcagaggaaggcggcgcgctgcag
ccggacggactgattgcccagatcagggaactgtatccgaatatccacgaagaaggcgga
atgctgggccaggagaaccggaaagatcccgcgacgccacgggaagcgttggagggcgtg
ggggactggctgacagaactgaaggacggcatgataccggaaataccgccggcatggaga
accgcgctggttcagctgctgcacaacggaacatacggaaaggcggcgcgccggctcctg
gaggaaatgctgccacaggaagaagaacaaaagctggagaaggatacggccaggaagctg
ttcatgacagacaggctgtccatcagccggttggagcagtttgcttcctgtccgtacagg
cattttatcgattacggcctgcgaccggtgaaacaggaagaattcacctacgagagcaac
gacgcgggaactttctttcacgaggcgctggaccggtatatgaagcaggtcggcgctgaa
aaggactggccgtatttcacggcggaacgggtcgacaacgtcatggacactatcctgacg
gagctcacagaggagtggaaggagacgccgcttcgggaagacgccatgggagagtggacg
ggcgagggctacctgcgccgtgtccgccgggcggcgcaggtactgacacggtttgccgcc
aacagcgaattccggacgattgcgacggagcagcccttcggtgaaggtgagggccttccg
ccggtgatcatcacgctggcggacggaagcaaaacggcgatccggggacagattgaccgg
attgacacctatgagaacggcgaaggcgtctggctgcgggtggtggacaacaagagcagg
ggaaagaagccggatcccgcaaaaatggaaaccggagaacagctgcagctgatgatttac
ctgaaggctgcggctgacagcatgccgggtacccggccggccggagccatgttcttcccc
attgaggataaagaagtatcgacggaagatgacaatccggaaaagattgagaacgacagg
atcagcgaagtccgtatgaagggcctgattacggcggaggaagacctgatccgggcgatg
gaccgggacgtgcatccgttctctgtggacaaggtgttcaacaaggatggaaccatcagc
aaatctgcatcctgggctgtggaagaaaagacgctcagcggactgatggacgcggcggtt
gaaaaagcgggagaactctgtgggcggatgcgcgacggagacatcgccgcaatgcccggt
gaagattcccttggcccggtgtgccggtactgtgattacaaagcaatctgccgcaacggc
ggcagggaaacacgcaagctgaacaccgggataacttatcaggatatcgccgggaaaaac
acgttgcgctaa
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