Clostridiales bacterium FE2010: JS518_04460
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Entry
JS518_04460 CDS
T08976
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JS518_04460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbaf03019
]
JS518_04460
03016 Transfer RNA biogenesis [BR:
cbaf03016
]
JS518_04460
Enzymes [BR:
cbaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
JS518_04460
Messenger RNA biogenesis [BR:
cbaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
JS518_04460
Transfer RNA biogenesis [BR:
cbaf03016
]
Prokaryotic type
tRNA degradation factors
JS518_04460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
QTE75147
LinkDB
All DBs
Position
complement(1006104..1008257)
Genome browser
AA seq
717 aa
AA seq
DB search
MESKKYTMDFAGRPLTLEFGRYCEQANGSVWVHLGDTVVMVNATMAPAPREGVDFFPLAV
DVEEKQYSVGKIPGGFIKREGRPSEKATLTCRLIDRPLRPLFEKGMRNDVQVVVTILSVE
QDVPPEIPAMIGSSVALAVSDIPWNGPTGAVLVGRVNGQFVICPDEAQRAESDLSLYVAG
TEEAIMMVEAGAKELSEETMLDAILFGHEEIKKLVAFQKQIVAEIGKEKQVVPLITTGDD
IKAAVREFAYDKCVWTFDTFDRSERQQREAQTKQETLAALAEKFEGRESEIEDALYYLNK
EVMRAKILNEGIRPDGRKVTEIRPIWCDVGVLPRTHGSAIFTRGQTQALTVTTLGTVSEG
QTLDGLSSEDFKRYIHHYNMPPYATGEAGRLKSPGRREIGHGALAERALLPVIPSEEEFP
YALRLVSEILSSNGSSSMASVCGSTLSLMDAGVPIHAPVAGVAMGLITDKESGKLAVLTD
IQGLEDFLGDMDFKVAGSMNGITALQMDIKIAGINRAILQQALRQALEGRLHILKIMLDT
LGQPRAELSPYAPKIIRFTINPEKIREVIGPGGKMINKIIAETGVKIDIEDDGSVFISTP
DQQAADKARHIIEGIAKDIEVGDVYTGKVVRIMNFGAFVELAPGKDGMIHISKLDNKRVE
KVEDVVNIGDELEVKVNEIDAQGRINLIRNDIEYASGTDFSRHDGNRRPPRRNSNHD
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggaatccaaaaagtacacaatggattttgccggccgtcccctgacgctggagttcggc
aggtactgtgagcaggccaacggttctgtctgggtccacctgggcgataccgtcgttatg
gtcaatgccaccatggctcccgctccccgcgaaggcgtggatttcttccctctcgcagtt
gatgtggaagagaagcagtattccgttggcaaaatccccggcggtttcatcaagcgtgaa
ggccgtccctctgaaaaggctaccctgacctgccgcctgatcgaccgtcctctccgcccc
ctgttcgaaaagggaatgcggaacgatgtccaggttgttgtcaccatcctcagcgtggaa
caggatgttcctccggaaatcccggccatgatcggttcttccgttgccctggctgtcagc
gatattccgtggaacggaccgaccggcgctgtgctggtgggccgtgtcaacggtcagttt
gtcatctgccccgatgaagcccagcgtgctgaaagcgatctgagcctctatgtggccggt
acggaagaggccatcatgatggttgaagccggtgccaaggaactgtccgaagaaaccatg
ctcgacgccatcctctttggtcacgaagagatcaaaaagctggttgccttccagaagcag
atcgttgccgaaatcggcaaggaaaagcaggttgtgccgctgatcaccaccggtgatgac
atcaaggccgctgttcgtgaatttgcctatgacaagtgcgtctggaccttcgatactttc
gatcgttctgaacgccagcagcgtgaagcgcagaccaagcaggagaccctggctgccctg
gctgaaaagttcgaaggccgcgaaagcgaaattgaggatgcgctgtactacctcaataaa
gaagtcatgcgcgcgaagatcctgaatgagggtattcgtcctgacggccgcaaggttacc
gaaatccgccccatctggtgcgatgtcggcgtccttccgcggacccacggcagcgctatc
ttcacccgcggccagacccaggccctgactgtgaccaccctgggcactgtcagcgaaggt
cagaccctggacggcctgagcagtgaagatttcaagcgctacatccatcactacaatatg
ccgccgtatgccaccggtgaagccggccgtctgaagagccccggccgccgcgaaatcggt
cacggcgctctggctgaacgggccctgctgcccgtcatcccctctgaggaagaattcccc
tacgccctgcgtctggtcagtgaaatcctgtcctccaacggttcttcttccatggcttcc
gtctgcggctccacactgagcctgatggacgccggcgttccgattcatgcccccgttgcc
ggtgtggccatgggtctgatcaccgataaggaaagcggcaagctggctgtcctgactgac
atccagggcctggaagacttccttggcgacatggacttcaaagttgccggttccatgaat
ggtatcactgccctgcagatggacatcaagattgcgggtatcaaccgtgccatcctgcag
caggcgctgcgtcaggcactggaaggccgcctgcatatcctgaagatcatgctggatacc
ctcggacagcccagggctgaactgagcccctacgctccgaagattatccgcttcaccatc
aatcccgagaagatccgcgaagtcatcggacccggcggaaagatgatcaacaagatcatt
gctgaaaccggtgtgaagattgatatcgaggatgacggcagcgtctttatctccacgcct
gatcagcaggctgccgataaggctcgccacatcatcgagggcattgccaaggatatcgaa
gtcggcgatgtgtataccggaaaggttgtccgcatcatgaacttcggtgcctttgtggaa
ctggctcccggcaaggacggtatgatccacatttccaagctggacaacaagcgggttgaa
aaggtggaagatgttgtcaatatcggtgacgagctggaagtcaaggtcaacgagattgac
gcccagggccggattaatctgatcaggaacgacattgaatatgcttccggaacggatttc
tcccgtcatgatggaaaccgtcgtcctccccgccgcaacagcaaccacgactga
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