Clostridiales bacterium FE2010: JS518_04780
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Entry
JS518_04780 CDS
T08976
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbaf
Clostridiales bacterium FE2010
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaf03032
]
JS518_04780 (topA)
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_04780 (topA)
Enzymes [BR:
cbaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JS518_04780 (topA)
DNA replication proteins [BR:
cbaf03032
]
Prokaryotic type
DNA Topoisomerases
JS518_04780 (topA)
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JS518_04780 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF7340
DNA_ligase_ZBD
Zn_ribbon_GRF
Motif
Other DBs
NCBI-ProteinID:
QTE75203
LinkDB
All DBs
Position
1070435..1072558
Genome browser
AA seq
707 aa
AA seq
DB search
MATNKQKLIIVESPAKAKTISKYLGKGYKVEASQGHVCDLPKSQLGVDIDHDFDLKYITI
RGRGDILSRIRKEAKNASQIYFATDPDREGEAISWHLFHVLGVDEKSPCRIEFNEVTKKA
VQAAIKKPRKLDMGRIDAQQARRALDRLVGYKISPLLWVKVKKGLSAGRVQSVATRMVVE
REREIDNFIPEEYWDITADCTVKGEKKPAAFSARFTTLDGQKTPVSNKTEAEQIRALIES
GDFTVTDIRKKEKKRQPAPPFTTSSLQQEAGRKLSFTTAKTMQVVQQLYEGVDLEGEGAQ
GLVTYIRTDSVRISDDAMTALRAFIPEKYGKEYLPKEKNEFKGRKNAQDAHEAIRPTDVT
RTPDSIKNSLSREQFMLYRLIYNRFVASQMAPAVYETLSAEITDKRIGLRFYGEHKIFAG
FTTLYEEGTDESEDNVEMTLPALKEGQKISVKQVNTDQHFTQPPSRYTEASLVRTLEENG
IGRPSTYAPTITTIIARGYVSREKKRLFPTELGIMVTEMMEKYFTQIVDTEFTAKMEEKL
DEVEEGQCDWKQILREFYPDFISTLSVAEKEIEKVEVKDDVSDVPCDKCGAMMVYKMGKF
GRFLACPNFPECRNTMPILTYIDAACPVCGKRLLEKTSRKNRKFYGCEGYPECDFVSWDK
PANEKCPQCGTYMIEKKNNKGETIHLCTNENCRFKKVVAVSGEEDNE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaacaaacagaaactgattatcgtggagtcccctgcaaaggccaagaccatc
agcaagtatctgggcaaaggatacaaggtggaagcctcccagggacatgtatgcgatctg
cccaagagccagcttggtgtggatatcgatcacgactttgatctgaaatacatcacgatc
cgcggacgcggcgacatcctgagccgtatccgtaaggaagcaaagaacgcttcccagatc
tacttcgcgacagaccctgaccgcgaaggggaagccatcagctggcatctgttccacgtg
ctgggtgtggatgaaaaatctccctgccggattgaattcaacgaagtgaccaagaaagcg
gttcaggctgcgatcaaaaagccaagaaaactcgatatgggccggattgacgcccagcag
gcccgccgtgcactggaccggctggtgggttacaaaatcagcccgctcctttgggtgaaa
gtgaaaaagggcttatcagccggccgtgtacagagcgttgcaacccgcatggttgttgaa
cgcgaacgtgaaattgacaactttattccggaagaatactgggacatcaccgctgactgc
actgtcaaaggagaaaagaaaccggccgccttcagcgccaggtttacaaccctggacgga
cagaaaacaccagtcagcaacaaaaccgaggccgagcagatccgggcactgattgaatcc
ggagattttacggttactgatatcaggaaaaaggaaaagaaacggcagcccgcgccgcct
ttcaccacctccagcctgcagcaggaagccggaagaaaactcagcttcaccacagccaag
acgatgcaggttgtccagcagctgtatgaaggcgtggacctggaaggagaaggcgcccag
ggtctggtgacctatatccgtaccgacagcgtccggatcagcgatgacgccatgacggcc
cttcgtgccttcattccggaaaaatacggcaaggaatacctgccgaaagagaaaaacgag
ttcaagggccgcaagaacgcacaggacgcccatgaagccatccggccgacagacgttacg
cgtacgcccgattccatcaagaattccctgagccgggagcagttcatgctctacaggctg
atttacaaccgttttgtggccagccagatggctcctgccgtctatgaaacattgtctgcc
gagattacagacaagcggatcggtctccggttttacggcgaacataagatctttgccgga
tttaccaccctgtatgaagaggggacagatgaatccgaagacaatgtggagatgacgctg
cccgccctgaaggaaggacagaagatctccgtaaaacaggttaataccgaccagcacttc
acccagcccccgagccgttataccgaagcaagccttgtccggacgcttgaggaaaacgga
atcggccggccttccacctatgcgccgacgattaccacgattattgcgcgcggatacgta
tccagggaaaagaagcgtctgttcccgacagaactcggcatcatggtgaccgagatgatg
gaaaagtactttacccagatcgttgacacggaattcaccgccaaaatggaagaaaaactg
gacgaagtggaagaaggccagtgtgactggaaacagatcctccgggaattctatcctgat
ttcatttcaacgctttccgttgcggaaaaagagattgaaaaagtggaagtcaaggatgat
gtcagcgacgtcccctgcgacaagtgcggcgcgatgatggtctataaaatgggcaaattc
ggacgtttcctcgcatgcccgaatttccctgaatgccggaacaccatgcccatcctgact
tacattgacgctgcctgtccggtatgcggcaagcgtctgcttgaaaaaacaagccgtaaa
aacaggaaattctacggatgtgaaggatatccggaatgcgacttcgtcagctgggacaaa
cccgccaatgaaaaatgcccgcaatgcggaacctatatgattgaaaagaaaaacaacaag
ggtgaaaccattcatttgtgcacaaacgaaaactgccgcttcaaaaaagtggttgcagta
agcggggaagaagacaatgagtga
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