Clostridiales bacterium FE2010: JS518_05685
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Entry
JS518_05685 CDS
T08976
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf03030
DNA replication
cbaf03430
Mismatch repair
cbaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JS518_05685 (holA)
03430 Mismatch repair
JS518_05685 (holA)
03440 Homologous recombination
JS518_05685 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaf03032
]
JS518_05685 (holA)
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_05685 (holA)
Enzymes [BR:
cbaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JS518_05685 (holA)
DNA replication proteins [BR:
cbaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JS518_05685 (holA)
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JS518_05685 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
QTE75372
LinkDB
All DBs
Position
1262265..1263272
Genome browser
AA seq
335 aa
AA seq
DB search
MDRKDFSRALSQHSLPQVLLFEGEEEHLKQEALAELRHAVLPEGMETLNETILEDPSVDQ
LIADVETQPFMADKRLIIVRDLPALMGRSEADERLIAYLPSVPETSFLLFYCTGKPDGRK
KLYNAVKKLSGIVTFSPLRGTELTRFVVSSFQEAGKECDDRTAEYLIFTVGSDAGLLRNE
IQKLASCSTDRTAILPEDVTALATPSTECTVFQMIDAVVTGQKSRAFTLLRNQLLSGTDR
MAILSMLLRQYRLLQHIKIMQYEKRGSDFIRSALGVPPFAVDQYVRQASGYTGGQVKSAV
RICFDTEYALKSGRMSQDGAVETVVLKLLNLRDKS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaaaagacttttcccgtgccctgtcacagcattccctgccccaggttctcctc
tttgaaggcgaagaggaacatctcaagcaggaagccctggctgaactgcgccatgccgtt
ctgcccgaaggcatggaaacattgaatgaaaccattctggaagatccttctgtggatcag
ctcatcgcagatgtggaaacccagccctttatggctgacaaacggctgatcattgtccgt
gatttaccggctcttatgggacgttccgaggcggatgaaaggctcattgcttaccttccc
tcagtccctgaaacttctttccttctcttctactgtaccggaaaacctgacggaaggaag
aaactttataatgctgtcaaaaagctctccgggatcgttactttttctccgctacgcggt
acggagctgacccgttttgttgtcagttcttttcaggaagcaggaaaagaatgtgatgac
cgtacagctgaatacctcatttttacggttggctcagacgcaggactgctgcgtaacgaa
atccagaaactggcttcctgttccacagaccgcactgcgattctgccagaggatgtaacg
gctcttgccaccccttccactgaatgtaccgtattccagatgatcgatgccgttgttaca
ggtcagaagagccgcgcctttacgctgctgcgcaaccagctgctttccgggacggaccgc
atggccatcctttcaatgcttctgcgccagtatcgtctgctgcagcacattaaaatcatg
cagtatgagaaaaggggcagtgattttatccgttccgctctcggggttccgccttttgct
gttgaccagtatgttcgacaggcctccggttataccggcggccaggttaaaagcgctgtc
cgcatatgttttgacacggaatacgccctgaagtccggacggatgtcccaggacggagct
gttgaaacagtggtcctgaaactgctgaaccttcgggacaaaagctga
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