Clostridiales bacterium FE2010: JS518_11060
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Entry
JS518_11060 CDS
T08976
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf00260
Glycine, serine and threonine metabolism
cbaf00460
Cyanoamino acid metabolism
cbaf00630
Glyoxylate and dicarboxylate metabolism
cbaf00670
One carbon pool by folate
cbaf00680
Methane metabolism
cbaf01100
Metabolic pathways
cbaf01110
Biosynthesis of secondary metabolites
cbaf01120
Microbial metabolism in diverse environments
cbaf01200
Carbon metabolism
cbaf01230
Biosynthesis of amino acids
cbaf01240
Biosynthesis of cofactors
cbaf04981
Folate transport and metabolism
Module
cbaf_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JS518_11060
09102 Energy metabolism
00680 Methane metabolism
JS518_11060
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JS518_11060
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JS518_11060
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JS518_11060
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JS518_11060
Enzymes [BR:
cbaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JS518_11060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QTE73453
LinkDB
All DBs
Position
complement(2442976..2444211)
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AA seq
411 aa
AA seq
DB search
MELELIRQADPEVAEAIGLELNRQRTHVELIASENFVSPAVMAAMGTCLTNKYAEGYPGK
RYYGGCECVDIIEDLARTRACKLFGAEHANVQPHSGAQANMAVYFAMLKPGDTVMGMGLS
NGGHLTHGSPVNMSGSYFNFVPYGVSSETEMIDYEDVRRIALECKPKMIVAGASAYPRVI
DFPKLRSIADEVGALLMVDMAHIAGLVAAGEHPSPVPFADFVTTTTHKTLRGPRGGMILC
REEYAKAIDKAIFPGTQGGPLEHVIAGKAVCFGEALKEDFRTYQHQIILNAKAMEKTFRE
EGVRMVSGGTDNHLLLLDFTGTEMTGKQMENLLEAANITVNKNTVPNETRSPFVTSGIRV
GTPAATSRGLKEAEFAKVASWIAKVLREGEAAVPEIKKQVEAMMANYPLYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaactggaactgatccgtcaggctgatcctgaagtagccgaggccatcgggctggag
ctgaaccgtcagcggacccatgtggaactgattgccagtgagaactttgtttctccggcg
gttatggctgccatgggtacctgcctcactaacaaatacgcggaaggctatccgggaaaa
cgctattacggcggatgcgagtgcgtggatattatcgaagacctggcccgcacgagggcc
tgcaagctcttcggcgctgaacacgccaatgtccagccccacagcggcgcccaggcaaat
atggctgtctacttcgccatgctgaagcccggcgatacggtcatgggtatgggcctgtcc
aacggcggccacctgacccacggcagccccgtgaatatgtccggttcctatttcaatttc
gttccctacggcgtttcttccgaaaccgagatgatcgattatgaagatgtccgccgcatt
gccctggagtgcaagccgaagatgatcgtcgcgggcgcttccgcttatccccgcgtcatt
gatttcccgaagctgcgttccatcgcggatgaagtcggcgccctgctgatggtcgacatg
gcgcacatcgccggtctcgtggccgccggtgagcatcccagccccgtccccttcgctgat
ttcgtgaccaccaccacccacaagaccctgcgcggtccccgcggcggcatgatcctgtgc
cgggaagagtatgccaaggctatcgacaaggccatcttccccggaacccagggcggcccg
ctggagcacgtgatcgccggcaaggctgtctgcttcggcgaagcgctgaaggaagacttc
cgcacctatcagcaccagatcatcctgaacgcgaaggccatggaaaagaccttccgtgaa
gaaggcgtccgcatggtgtccggcggaacggacaaccacctgctgctgctggacttcacc
ggtacggaaatgaccggcaagcagatggaaaacctgctggaagcggccaacatcacggtg
aacaagaacaccgtgcccaatgagacccgcagccccttcgtgaccagcggtatccgcgtg
ggtactcccgctgccacttccaggggtctgaaggaagcggaatttgccaaggttgccagc
tggatcgccaaggtcctgcgcgagggcgaagccgccgttccggaaatcaagaagcaggtc
gaagccatgatggccaactacccgctctacgcgtaa
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