Clostridiales bacterium FE2010: JS518_11685
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Entry
JS518_11685 CDS
T08976
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JS518_11685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbaf03019
]
JS518_11685
03009 Ribosome biogenesis [BR:
cbaf03009
]
JS518_11685
Enzymes [BR:
cbaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JS518_11685
Messenger RNA biogenesis [BR:
cbaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JS518_11685
Ribosome biogenesis [BR:
cbaf03009
]
Prokaryotic type
rRNA helicases
JS518_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
PhoH
Cas3-like_C_2
z-alpha
Motif
Other DBs
NCBI-ProteinID:
QTE73566
LinkDB
All DBs
Position
2568520..2569698
Genome browser
AA seq
392 aa
AA seq
DB search
MNSESTTVSFESMDLSSEILRAVQAMGFKEPSTVQAKTIPLMMEGHDINAIAPTGTGKTC
AFGIPMLEYVQLKDSRVQEIVLAPTRELALQIGEELTKLAKFIDGVRIAVIYGGQSISRQ
ITALKRRPQIVIATPGRLLDHMQRGNIRLDAVHTMVLDEADEMLNMGFVKDVTKIIESTP
SDRQLVLFSATTNQDVLTIAWKYQHDPVEITVEATKADRPQITQYVIATEQDSKTDNLLY
LLDANVYQRIMIFCNTKFMTDKLTSRLIKEGYNAQCLHGDIPQSKRNTVMNDFKRGKFPI
LVSTDVAARGIDVDDVEAVINYDLPNENEYYLHRIGRTGRAHKHGVSFSLVTFRESVRMD
EILKYMLTAPTPLKFEDDVLRREDGSAFFENI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaattccgaatcaactacagtatcttttgaatccatggatctctcctcagagatcctc
cgtgccgttcaggcaatgggctttaaagagccctccactgttcaggcgaagaccattccc
ctgatgatggaaggtcatgacatcaatgccatcgcccccacgggcaccggcaaaacctgt
gcctttggcattcccatgctggagtacgtccagctgaaggacagccgcgtacaggagatc
gtcctggcccccacccgggaactggcgctccagatcggcgaggaactgaccaagctggcc
aagttcatcgacggcgtgcgtattgccgttatctatggcggtcagtccatctcccgtcag
attaccgcgctgaaacgccggccgcagattgtcatcgcgacccccggccgcctgcttgac
catatgcagcggggcaacatccgtctggatgccgttcacaccatggtgctggatgaggcg
gacgaaatgctgaacatgggctttgtcaaagacgtgacaaagatcatcgagtccacccct
tccgaccgccagctggtgctgttctccgccaccaccaatcaggacgtgctgacgattgcc
tggaaataccagcatgatccggtggagatcaccgttgaggccacaaaggccgaccggccc
cagatcacccagtacgttatcgccaccgaacaggacagcaagaccgataacctgctctac
ctgctggacgccaacgtttatcagcggatcatgatcttctgcaacaccaagttcatgacc
gacaagctgaccagccggctcatcaaggaaggctataacgcccagtgcctccatggggac
atcccccagtccaaacggaacaccgttatgaatgatttcaaacgcggcaagttcccgatt
ctcgtatccacagatgttgccgcccgcggtatcgacgtggatgatgtggaagccgttatc
aactacgatcttcccaacgagaacgagtactatctccaccgcatcggccgtaccggccgc
gcccataagcacggagtcagtttctccctggtcaccttccgggagagcgtccgcatggat
gaaatcctgaagtatatgctcaccgcgccgacgcccctcaagtttgaggatgacgtgctg
cgccgggaagacggctctgcattctttgaaaacatttga
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