Clostridiales bacterium FE2010: JS518_11780
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Entry
JS518_11780 CDS
T08976
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf03410
Base excision repair
cbaf03430
Mismatch repair
cbaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JS518_11780 (recJ)
03430 Mismatch repair
JS518_11780 (recJ)
03440 Homologous recombination
JS518_11780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_11780 (recJ)
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JS518_11780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JS518_11780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JS518_11780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ThiG
CDC45
His_biosynth
DUF2399
Motif
Other DBs
NCBI-ProteinID:
QTE73580
LinkDB
All DBs
Position
2590026..2591681
Genome browser
AA seq
551 aa
AA seq
DB search
MTHTRFIQRCVSDCPPFNGLPDWMSRLLFARGIHTEEESRRYLNPSLDDLHDPFLLPGMT
ETVALLRKAIDEGKTILVYGDYDADGVCAASILMETLHEEGASLAYRIPSRHTEGYGLNA
DAVREIAEKAQVLITVDCGVSNVEEVALAKSLGLTVIVTDHHQPPEILPQADVVMDPLLG
EYPCPYLCGAGVALKICQALQGMPGVEKRLDLAALATVADIVPLQEENRVIVREGLHRIM
NTSRPGLKALLEKAGLQAAVTADDLAFRLGPRLNAAGRLGDAKLGVHLLLTPDPAKASHI
AGLLEEANRTRQNLEREMTASALTQLDAAELAKSHVVIVSGEDWNPGLIGLTAGRLCERF
HLPAIALSIHEGTAVGSCRSIPGVNIYRMLSACADLLERFGGHEQAAGLTVKTENIPLLQ
KRLEEEISSAAPEECFLPAMEYDMIVPFRTWTPETLAMLDRMEPFGCGNPAPLFLLQGAE
VQSLRRVGKDDSHLKLTVLDEDLSVVDGIAFSKGDVADESPAVLDLLYRPIRNDFRGRVS
IEAQVACINAE
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacccatacacgtttcattcagcgatgtgtttcggattgccctcctttcaatggtctt
ccggactggatgtccaggcttctctttgcccgcggcatccatacagaagaagaatcccgc
cgttacctgaatccctcattggatgatctccatgaccctttcctgctccctggcatgacg
gaaaccgttgccctgctcaggaaggccattgatgaaggaaaaaccatcctcgtttacggc
gactatgacgcagacggcgtctgcgctgcctccatcctgatggaaaccctgcacgaggaa
ggcgcgtccctggcataccgcattccttcccgtcacaccgaaggctacggcttgaatgcc
gatgctgtccgtgaaatagcggaaaaagctcaggttctgattacagtggactgcggtgtc
tccaatgtggaagaagttgccctggcgaagtcccttggtctgaccgtcatcgtgacagac
catcaccagcctccggaaattctcccccaggctgacgtggtgatggatccgcttctggga
gaatacccctgcccctatctgtgcggtgcgggcgtggcgctcaaaatctgccaggccctt
caggggatgccgggtgtggaaaagcggctggatcttgctgccctcgccaccgttgcggat
atcgtccccctgcaggaagaaaaccgggtcatcgtccgggaaggacttcatcgtatcatg
aatacctcccggcccggcctgaaagcgctgctggaaaaagccggactacaggctgcggtt
accgccgatgatcttgcgttccgcctcggtccccggcttaacgctgccggccgcctggga
gacgcaaaactcggcgtccatctgctcctgaccccggatcccgctaaagcctcccatatc
gcaggtctgctggaggaagccaaccgcacccggcagaacctggagcgggagatgacagcc
tccgccctgacccagctggatgcggctgagctggcaaaatcccatgtggtcattgtttcc
ggagaggactggaatcccggcctgatcggcctcaccgccgggcggctgtgtgaacgcttt
cacctgcctgccatcgctctcagcattcatgagggcactgccgtcggttcctgtcgttcc
attcccggtgtcaatatttatcgtatgctctccgcctgcgccgacctgctggagcgcttc
ggcggacatgaacaggcggccggcctgaccgtaaagacagagaatattcccctgcttcag
aaacggctggaagaagaaatctcttccgccgcaccggaggaatgcttcctgcccgccatg
gaatatgacatgattgtcccattccgtacctggactcccgaaacccttgcaatgctggat
cgcatggagcctttcggctgcggcaaccccgcaccgctcttcctgctgcagggtgctgaa
gttcagtccctccgccgggtaggcaaagacgactcccatctgaagctgactgtcctggat
gaggacctgtccgttgtggacggcattgccttctcaaagggcgacgtcgctgacgaaagc
cctgccgtcctggacctgctctatcgtcccatccggaacgacttccgcggccgcgtcagc
attgaagcccaggtggcatgtattaatgcagaatga
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