Clostridiales bacterium FE2010: JS518_11950
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Entry
JS518_11950 CDS
T08976
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JS518_11950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_11950
Enzymes [BR:
cbaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
JS518_11950
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JS518_11950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
OB_YrrC
UvrD_C_2
Viral_helicase1
HHH_5
AAA_11
UvrD-helicase
AAA_22
AAA_23
SLFN-g3_helicase
AAA_16
NAT10_TcmA_helicase
nSTAND3
ABC_tran
DEAD
AAA_28
NTPase_1
T2SSE
NPHP3_N
PIF1
HHH_2
AAA_29
KAP_NTPase
DNA_pol_lambd_f
RsgA_GTPase
TrwB_AAD_bind
Herpes_Helicase
ABC_ATPase
AAA_5
cobW
Motif
Other DBs
NCBI-ProteinID:
QTE73613
LinkDB
All DBs
Position
2630858..2633092
Genome browser
AA seq
744 aa
AA seq
DB search
MEQLEATIQGTVFRNEENGWSVLTVRSGRSEITVVGSLPELSPGEQAVFSGDWIEHRTYG
RQFHCVSCELKTPTTLLGIERFLGSGLIHGVGPSTAQLIVEAFGEETLVVLSEHPERLSE
VRGIGKKRAIMIAESFREQQSTRRAMVFLQSYGISPALAIRISRHYGDRTPEIVRENPYR
LCDDLEGVGFKTADRIGLSLGIPPDSENRVKSAMTYILRDAAAASGHVYLPETELCSASA
SLLNVPLTLCQQALRSMLVSGALHSETDEAAENRRVYLPYYRYAEQEVALMIRRLMVAIT
PDKYAGVSRAISSFEKRRNITFSPTQRQAIAGALENGVFVITGGPGTGKTTIINCILELL
SKDNETVLCAPTGRAAKRMSEATGAEARTIHRLLEYSGEQGAFTRTDDNPLEADCVIADE
TSMIDLVLMRALLKAIRPGTRLILVGDADQLPSVGAGNVLGDILDSGEVPCVRLTEIYRQ
SGESQIVVNAHLINNGQMPVLNGKGTDFFFERKTALADAAQSITALVTSRLPGYLHYPEE
ERLSLSVRNIQVLAPSRKGECGVNSLNLRLQEMLNPPASDKPQLQWGETIFRLGDKVIQT
RNDYRLPWRRETSAGIEDGAGVFNGDIGFIIDVDPENHMLTVRFDEEREATYESGDLEDL
EPAYCLSVHKSQGSEFPVVVMPVTPGPPMLLTRNLLYTALTRARSLVVLVGTEAVIRRMV
ENDHVICRYTTLARRLIETRELVQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcttgaggcgaccatccagggtaccgttttccggaatgaggaaaacggctgg
tccgtcctgaccgtccgttccggccggtcagagattaccgtggtcggctccctgccggag
ctgagtcccggtgaacaggctgttttttcaggcgactggatagaacatcgtacctacggc
cgccagtttcactgtgtctcctgcgaactgaaaacgcccacaaccctcctggggattgag
cgattcctcggcagcggcctgatccacggtgtgggtccgtccactgcccagctgattgtt
gaagccttcggggaagaaacccttgtggttctctccgagcatccggagcgcctgagcgag
gttcgcggcatcggcaaaaagcgagccatcatgattgccgaaagcttccgggagcagcag
agcacccggcgcgccatggtcttccttcagtcctacggtatttcccctgccctggccatc
cggatcagccggcattacggcgaccgcaccccggaaatcgtccgggagaatccttaccgc
ctgtgcgatgacctggaaggcgtggggttcaaaaccgcggaccgcatcggtctgtccctg
ggcattccgcccgacagtgaaaaccgcgtcaaatccgccatgacctatatcctgcgggat
gctgccgctgcttcaggtcatgtttacctgccggaaacggagctctgttccgcctccgcc
tcgctgctcaacgtgccgctcaccctttgtcagcaggcactgcgcagcatgcttgtttcc
ggcgcgcttcattccgaaacggatgaagcggcagaaaaccgccgggtttacctgccttat
taccgttacgcggagcaggaggtcgccctcatgatccgccgcctgatggttgccattaca
cccgacaaatacgccggtgtttcccgggcgatttcgtcctttgaaaaacgccggaacatc
accttctcccccacccagcgccaggccattgccggtgcgctggaaaacggtgtctttgta
attaccggcggccccggcacaggcaaaaccacgatcatcaactgcattctggagctgctc
tcgaaggataacgagacggttctttgcgcccctaccggccgcgccgccaaacggatgagc
gaggccaccggcgcagaagcgcgaaccattcaccgcctgctggaatacagcggtgagcag
ggcgccttcacccgcacggatgacaacccgctggaagcggactgcgtcatcgcggatgaa
acctccatgatcgacctggtcctgatgcgcgccctgctgaaggccatccgccccggcacc
cgcctgatcctcgtcggcgacgcggatcagctgcccagcgtcggcgcgggcaacgtgctc
ggcgatattctcgacagcggtgaagtgccttgtgtccgccttacggaaatctaccgccag
agcggggaaagccagatcgtcgtgaacgcccacctgatcaataacggacaaatgccggta
cttaacggcaaaggcacggatttcttctttgagcgtaaaaccgccctggccgacgcagcc
cagagcatcacggccctggtcacttcccggctgcccggttatctgcattatccggaagag
gagcgtctctccctttccgtccggaacatccaggttcttgctccctcccgcaaaggagaa
tgcggcgtcaacagcctcaacctccgcctgcaggaaatgctcaacccgcccgcctcggac
aagccgcagctgcaatggggagaaaccatattccgtctgggagacaaggtcatccagacc
cggaatgattaccgtcttccctggcgccgggaaacctccgccggcattgaggacggtgcc
ggtgtgttcaacggcgatatcggcttcatcatcgacgtggatccggaaaaccatatgctt
accgtccgctttgatgaggagcgggaagccacctatgaatccggagacctggaagacctg
gagcccgcctactgcctcagcgtgcataaatcccagggcagtgagttcccggtggtcgtc
atgcccgtgacccccggaccgcctatgctgctcacccgcaacctgctttatactgccctg
accagggcccgcagcctcgtggtgctggtcggcaccgaggccgtgatccgccgcatggtg
gaaaacgatcatgtgatctgccgctacaccaccctggcccgccggctgatcgaaacccgg
gagcttgtacaatga
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