Clostridiales bacterium FE2010: JS518_12475
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Entry
JS518_12475 CDS
T08976
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbaf
Clostridiales bacterium FE2010
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_12475
Enzymes [BR:
cbaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JS518_12475
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JS518_12475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
ResIII
Phe_tRNA-synt_N
EloA-BP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QTE73705
LinkDB
All DBs
Position
complement(2780291..2783716)
Genome browser
AA seq
1141 aa
AA seq
DB search
MMWTEDQQRVISSSSQKLICSAAAGSGKTAVMIERIVRLIREGADPFSFLVITFTNAAAA
EMKEKIRKRLLAERKDPIIASAAEKASAMEICTIHAFCQHLIRQEFQIVGVDPFFQISTG
AQREQLFADAFRQACNKLRDEGDEDYLSFIRQYEPGEARTIVTTVWGFIMSLPDPFGWLK
TKAEDVPLYVDRDHPWFRTVSRMVNEKILRLQIILRQQADMFDEYEKQEAYRPVFIEDQK
RVETLCRWRDGEDISRDELEKGFCKVPVLRNLNDREIDWKERYQNYRKQLKDICSELQTW
ILPDHEKITREFTEIRNSLRGLARITEETHLAYEKNKARACVLDFTDLEHKALAILQDET
VRESVRSRYQRIFVDECQDVSSVQDALIQALAGEKNTLFMVGDVKQSIYRFRQANPKLFL
SRITDQGPDAGECIFLQENFRSRPEVLETANIIFRDVMRKEAADLEYAPSDELRAGRTDC
EGHVPVMVDLLNVGEEQTRLEAVANHTAEQIRQMTEEKKYRYKDMMILMPEVSTDGPKLT
DLLKERGIPVFFDGKGGFFEQQEVIVFRNLLMLVDNPHLDLPLLTALVNPPFDFTEEELS
HIRLKYTGKKKPFWQAFEMMAEEKSPLGMKCREVKEKLEGWRFLAPRTHLSDFLWYLLED
TLLCAIYGASDHGNAAKKNLRSLCLQAEQAADHGIYSLRDFLNFLSEQASGGEMQAASAL
GNDDDLVRIMTMHKSKGLQFPVVFCLGLDKGLKGRAGERVQLDEELGLCLRYKVPEWRLC
RKTAADEIFTWKKDHDVKAEKICLLYVAITRAQEKLFLVGTDTDRPIWYMPPGDHRTLAA
SDYLDLIMPALMDDDKKSTSFAQASKPYKIRIFDSIQQKTVERPEVIHNLKSWVETLLSA
PPVDELWKNDSDQNLLPEDENRLKKYSVTALLRNARNRIFLEEEEQTPEEKRTPDYVERM
LRKYETGSRPSFMDPVKEAGGAARGTVIHRFLSLVNLDAVRQEGGTDEDQLIAIRDRLVS
EQVFTPEEAAWIRPEIISRFFASEIGKRMLASPEVHREWDFNLYVQERGMIVQGMIDCAF
REGDGWILLDYKTDHIEDETAFIEEYRPQLEWYAVALRELTGKPVLESWLYALSVDKAYR
L
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggacagaagaccagcaaagggtgatcagttcctcttcgcagaagctgatctgt
tccgctgcggccggcagcggtaaaactgctgtcatgattgaaagaattgtgaggctgatc
cgggaaggagcagaccctttttcttttctggtgattacctttaccaacgctgctgccgcg
gaaatgaaggaaaagatccggaaacggctgctggcggaaagaaaggatccgatcattgca
tcggcggctgaaaaagcgtccgccatggaaatttgcacgattcacgccttctgccagcat
ctgatccgtcaggagtttcagattgtaggggttgatccgttcttccagatcagtaccggt
gcacagcgggaacagctgttcgcggatgctttccgccaggcatgcaataaactgcgggat
gaaggcgacgaggattacctgtcctttatccggcagtatgaaccgggagaagcccggaca
attgtcacaacggtctggggctttattatgagtcttcctgatcccttcggctggctgaaa
acgaaggctgaggacgttccgctgtatgtggaccgggatcatccctggttccggacggta
tcccggatggtcaatgaaaaaatcctgcggcttcagattatcctgaggcagcaggcggat
atgtttgatgaatatgaaaaacaggaagcttaccgtcctgtctttattgaggatcagaaa
cgggtggagacgctttgccgctggagagacggagaagatatcagccgtgacgaactggaa
aaaggtttctgcaaagttccggttctgagaaacctgaatgaccgggagattgactggaaa
gaacggtaccagaattaccggaaacagctgaaggatatctgcagcgaactgcaaacctgg
attctgccggatcatgagaaaatcacaagggagtttacggaaatccgaaattccctgcgg
ggccttgcgagaattacggaagaaacccatctggcctatgaaaagaataaagcccgagcc
tgtgtgctggattttaccgatttggaacataaagccctggcaattcttcaggacgaaaca
gtcagggaatcggtccggagccgttatcagcggatatttgtggatgaatgccaggacgtt
tcctctgtccaggatgctttgatccaggcgctggccggggaaaaaaataccctgtttatg
gtcggggatgtaaagcagagcatctatcgattccgccaggccaatccgaagctgtttctt
tcccggattacggatcagggaccggacgcgggagagtgtattttcctgcaggaaaacttc
cgttcccgtccggaagtcctggaaacagccaatatcattttccgggacgtcatgcggaaa
gaggctgcggaccttgaatatgcgccgtcggatgagctgcgggccggccgcactgactgt
gaaggtcatgtacccgtgatggtggatctgctgaatgtgggcgaggagcagacacgactg
gaagctgtcgcgaatcatacggcggaacagatccggcaaatgactgaggaaaagaagtac
agatataaggatatgatgatcctgatgccggaggtcagcaccgacggaccgaaactgacg
gatctgctgaaggaacggggcattcctgtcttctttgatggaaaaggcggcttctttgaa
cagcaggaagtaatcgttttccgcaacctgctgatgctggtggataatccccatctggat
cttcccctgctgaccgctctggtgaatccaccctttgactttacggaagaagaactgagt
catatccgcctgaagtataccggcaaaaagaagccgttctggcaggcctttgagatgatg
gcggaagaaaagagcccgctgggaatgaaatgccgggaggtaaaggaaaagctggagggc
tggcgtttcctggcaccgcggacacatctttcagattttctatggtatctgctggaggat
acgctcctgtgcgcaatttacggagcgtcggatcacggaaatgctgccaaaaagaacctc
agaagcctctgtcttcaggcggaacaggctgcggatcatggaatatacagtctgagggat
ttcctgaatttcctttcggagcaggcatccggcggtgaaatgcaggccgcttcggctctg
ggaaatgatgatgacctggtccggatcatgaccatgcataaatcaaaaggcctgcagttt
ccggttgtgttctgcctggggctggacaagggactgaagggcagagccggagaacgggtg
cagctggatgaagagctgggtctgtgtctgcgctacaaggttccggagtggcgcctgtgc
cggaaaacggctgccgatgaaatcttcacatggaaaaaagaccatgacgtgaaagcggaa
aaaatatgtcttctctatgtggcgattacccgtgcccaggaaaaattgttcctggtcgga
acggatactgaccggccgatctggtacatgcctcccggggaccacagaacgctggctgcc
tcagattacctggatctgattatgcctgcactgatggatgacgacaagaaatccacaagc
tttgcacaggcttcaaagccttataaaataaggattttcgatagtattcaacagaaaact
gtggaaagacctgaagttatccacaacctgaaatcatgggttgaaaccttactttctgca
ccgcctgtggatgaactgtggaagaatgattctgatcaaaacttgcttccggaagacgaa
aaccggctgaaaaaatactccgtcacagcattgctccggaatgcacgtaaccgtatcttc
ctggaggaagaggaacagacgccggaagagaagcggacgccggattatgtggagcggatg
ctccggaagtatgagacgggcagcaggccatcgtttatggatcctgtaaaggaagcggga
ggcgcggccaggggtacggtaatccaccgtttcctgtcactggtgaatctggatgctgtc
cggcaggaaggcggaacggatgaggatcagctgattgccatccgggacaggctggtcagt
gaacaggtatttacaccggaagaagcggcgtggatccgtccggaaattatcagcaggttc
tttgcttccgaaatcggaaaacggatgctggccagtccggaagtccacagggaatgggat
ttcaacctgtatgtgcaggaacggggtatgattgtacagggaatgatcgactgtgctttc
agggaaggcgacggatggatcctgctggattacaaaacggatcatatagaggatgaaacc
gcttttatagaggagtatcgtccccagcttgagtggtatgctgtagcgctgcgggaactg
accggtaaaccggtcctggagagctggctttatgccctgtctgtggataaagcatacagg
ctttaa
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