Clostridiales bacterium FE2010: JS518_12500
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Entry
JS518_12500 CDS
T08976
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cbaf
Clostridiales bacterium FE2010
Pathway
cbaf03030
DNA replication
cbaf03410
Base excision repair
cbaf03420
Nucleotide excision repair
cbaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JS518_12500 (polA)
03410 Base excision repair
JS518_12500 (polA)
03420 Nucleotide excision repair
JS518_12500 (polA)
03440 Homologous recombination
JS518_12500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbaf03032
]
JS518_12500 (polA)
03400 DNA repair and recombination proteins [BR:
cbaf03400
]
JS518_12500 (polA)
Enzymes [BR:
cbaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JS518_12500 (polA)
DNA replication proteins [BR:
cbaf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JS518_12500 (polA)
DNA repair and recombination proteins [BR:
cbaf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JS518_12500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JS518_12500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QTE73710
LinkDB
All DBs
Position
2788683..2791247
Genome browser
AA seq
854 aa
AA seq
DB search
MKDIFLLVDGNSLMHRAFHALPVMDADGIYTNAVYGFLSMLLKVIKEENVQYLAVCFDEH
GPTFRHTVYADYKAGRKETPPELRQQFGTILSLLDDMGIRRFSLQGWEADDLLGTLSLKG
AAAGATPLLLTGDRDALQLVGGGTELMFTRKGISETIRFTPSKVYEEYGFTPEQVTDWKG
LAGDSSDNIPGVPGVGDKTAVKLLQEYGTLEKVLENADKMKGKLGEKLAAYADQARFSKE
LATIRRDAPVEFTLSSCVLPDLRKGIPALAKLKLNSIIKRLDSEGKGGETEEKKGPEALA
FEPAVSLESVSGIAAWLDETKAAGPLCVYVSEMAVSLAREGGKRAEISLGGDLLNPGMDP
AEVLGVLAGELKKGEAIVHDGKTLLHLLDRCGLEGPESFGWDTMLAAYLLNPQEKSYRLG
ALCPDLPEDAGTLCSLAVWQKNRVEEDGMTRLMKEIEQPLSFVLFRMEQAGFTVNTEFLR
DLGNKYTAEIDEKREQVIAAAGHPFNLNSTQQLGEVLFEEMNLPHGKKTSKGYSTSVEVL
EGLRFDAPEIIEPLLRYRQLTKLNSTYVEGLLRLVDGKGRVHSTFDQTATATGRISSSEP
NLQNIPVRTEEGKEIREAFLPREGWVLLDADYSQIELRLMAHFSGDPALIDAFRKGEDIH
ALTASEIFDVPPEWVTPELRSRAKAVNFGLIYGISGFGLSRNTGVSRKEAAAFIEKYFQT
YPGVKRFMDRTASEGADRGYAETLMGRRRYLPELRSPKAPIREFGKRAAMNTPVQGTAAD
IIKLAMVRIDRALREAGLKSRLILQVHDELLLECPPEEAKQAAALLREAMEDAIELQVPL
VAEVHEGENWACAK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
ttgaaggatatctttctgctggtggacggaaacagcctgatgcaccgtgctttccatgct
cttccggtcatggacgcggacgggatttataccaatgcggtgtacggctttttaagcatg
ctgctcaaggtgatcaaagaggaaaacgtgcagtacctggcggtttgctttgatgaacac
ggcccgaccttccgtcatacagtgtatgcggattacaaagccggacggaaggagacgcct
ccggaactgcggcagcagttcggcaccatcctgtccctgctggatgatatgggaatccgc
cgtttctccctgcagggctgggaggcggatgacttgctgggaacgctgagcctgaaaggt
gctgcggccggcgcgacgcccctgctgctgaccggtgaccgggacgccctgcagctggtg
ggcggcggaacggagctgatgttcacccgcaagggcatttcagaaaccatccgttttact
ccctcaaaagtatatgaagaatacggttttaccccggaacaggtgacggactggaaaggc
ctggcgggggactccagcgacaatattcccggtgtgccgggcgtcggcgacaagaccgcg
gtaaaactgctgcaggaatacggcaccctggaaaaggtgctggaaaacgcggataagatg
aagggcaagctgggtgaaaagctggcggcttatgcggaccaggcccgcttcagcaaggag
ctggcaacaatccgccgggacgcgccggtggaattcaccctcagctcctgtgtcctgccg
gatctgagaaaaggcattccggcattggcgaagctgaagctgaacagcatcatcaaacgg
ctggacagtgagggaaaaggcggggaaaccgaagagaagaaaggtccggaagcattggct
tttgaaccggcggtctcccttgagtccgtatccggtattgccgcctggctggatgagaca
aaggcagcgggaccgctgtgcgtatatgtatcggaaatggcggtttctctggcccgggag
ggcggtaaacgcgcggaaatcagcctcggcggcgacctgctgaatcccgggatggatccg
gcggaagtgctgggcgtgctggcaggggagctgaaaaagggagaagcaatcgttcatgac
ggcaagacgctgctgcacctgctggaccgctgcggcctggaagggccggaaagcttcggt
tgggatacgatgctggcggcttacctgctgaatccgcaggaaaaaagctaccggctgggc
gccctgtgtcccgatctgccggaggacgcgggtacgctttgttccctggcggtatggcag
aaaaaccgggtggaagaagacggcatgacacggctgatgaaggaaatcgagcagccgctg
agcttcgtgctgttccggatggaacaggcaggatttaccgtcaacacggaattcctgcgg
gatctgggaaacaagtatacggcggagattgacgaaaagcgggagcaggtgatcgcggcc
gcgggtcatccctttaacctgaacagcacccagcagcttggcgaggtgctgtttgaggag
atgaatctcccccatggaaagaaaacttccaagggatattccacctcggtggaggtgctg
gaaggcctgcgctttgacgcgccggagattattgagccgctgctgcgctaccgccagctg
accaagctgaacagtacctatgtggaaggactcctgcggctggtggacggaaagggccgg
gtgcattccacctttgaccagacagccaccgccacgggaaggatttcctcttcggaaccg
aacctccagaatattcccgtccggacggaggaaggaaaggaaatccgggaagcgttcctg
ccccgggaaggctgggtgctgctggacgcggactacagccagatcgaactgcggctgatg
gcccatttctccggggatccggcgctgattgacgccttccgcaagggagaggatattcac
gcgctgacagccagcgaaatctttgacgttccgccggaatgggtgacgccggagctgcgc
agccgggcaaaagcggtgaacttcggcctgatctacggcatcagcggtttcggcctgagc
cggaataccggtgtcagccgcaaagaggccgcggcatttattgaaaaatacttccagact
tatccgggtgtgaagcgcttcatggatcgtacggcgtcggaaggagccgaccggggctat
gcggagacgctgatgggccggcgccgttatctgccggaactgcgttctcccaaggcgccg
atccgggagttcggaaagcgggcggccatgaatacgccggtccagggaacggctgcggat
atcatcaagctggccatggtccggattgaccgggcgctgcgggaagcggggctgaaaagc
cggctgatcctccaggtacacgacgaactgctgctggagtgcccgccggaggaggcgaaa
caggcggcggcactgctgcgggaagccatggaggacgccattgaactgcaggttccgctg
gtggcggaggtgcacgaaggcgagaactgggcttgcgcaaaataa
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