Camelus bactrianus (Bactrian camel): 105081326
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Entry
105081326 CDS
T07534
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
cbai
Camelus bactrianus (Bactrian camel)
Brite
KEGG Orthology (KO) [BR:
cbai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbai03016
]
105081326 (RTCB)
Enzymes [BR:
cbai01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
105081326 (RTCB)
Transfer RNA biogenesis [BR:
cbai03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105081326 (RTCB)
Prokaryotic type
tRNA splicing ligases
105081326 (RTCB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
105081326
NCBI-ProteinID:
XP_010968780
UniProt:
A0A9W3FB27
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSRSYNDELQFLEKINKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDI
NCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
PEGQDYLKGMAAAGILNPPGTVEVALLFSTKVAFAKVFNTTPDDLDLHVIYDVSHNIAKV
EQHVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQG
MTETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNV
TDVVNTCHDAGISKKTIKLRPIAVIKG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagttataacgatgagctgcagttcttggaaaagatcaataaaaactgctgg
agaatcaagaagggcttcgtgcccaacatgcaggttgaaggagttttctacgtgaatgat
gctctggaaaaattaatgtttgaagaattaaggaatgcatgtcgaggtggtggtgttggt
ggcttcctgccagccatgaaacaaattggcaatgtggcagccctgcctggaattgttcat
cgatccattgggcttcctgatgtccattcaggctatgggtttgctattgggaatatggca
gcttttgatatgaatgaccctgaagcagtggtatccccaggtggtgtcggatttgacatc
aactgtggtgtccgcttgctaagaaccaatttagatgaaagtgatgtccagcctgtgaag
gagcaacttgcccaagctatgtttgaccacattcctgttggggtgggatcaaaaggtgtc
atcccaatgaatgccaaagacttggaggaggccttggagatgggtgtggactggtcccta
agggaaggttatgcctgggctgaagacaaggagcactgtgaggagtatggaaggatgctg
caagctgaccccaacaaggtctctgccagggccaaaaaacgaggccttccccagttgggg
accctaggagcaggcaaccattatgcagaaatccaggttgtggatgagattttcaatgaa
tacgcagctaagaaaatgggcatcgaccataagggacaggtgtgtgtgatgatccatagt
ggaagcagaggcttgggccaccaagtagccacagacgcactggtggctatggaaaaagcc
atgaagagagacaagattatagtcaatgaccgtcagttggcttgtgctcgaattgcttcc
ccagagggtcaggactacctgaagggaatggcagcagctgggattctaaaccctccaggt
acagttgaagttgctcttctcttttcaaccaaagttgcttttgccaaggtcttcaacaca
acccctgatgacttggacctgcatgtgatctatgatgtttctcacaatattgccaaagta
gaacagcacgtggtggacggaaaggaacggactcttttagtacacaggaaggggtctacc
cgtgctttccctcctcaccatcccctcattgctgttgattaccaactcactggacagcca
gtgctcattggtggcaccatgggaacctgtagctatgttcttactggcactgagcagggc
atgactgagacctttggaacaacctgtcatggagcgggccgtgcactgtcccgagcaaaa
tcaagacgtaatttagatttccaggatgtcctagacaaattggcagatatgggaattgca
atccgtgttgcctcacccaagttggttatggaagaggcacctgagtcctataaaaatgtg
accgatgtggtgaacacctgccatgatgctggaatcagcaagaagaccattaaactgaga
ccaattgctgttatcaaaggatag
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