KEGG   Camelus bactrianus (Bactrian camel): 105081689
Entry
105081689         CDS       T07534                                 
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
  KO
K14792  rRNA biogenesis protein RRP5
Organism
cbai  Camelus bactrianus (Bactrian camel)
Brite
KEGG Orthology (KO) [BR:cbai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cbai03009]
    105081689 (PDCD11)
Ribosome biogenesis [BR:cbai03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    105081689 (PDCD11)
SSDB
Motif
Pfam: S1_RRP5 S1 HAT_PRP39_N OB_RRP5 Spt6_S1 HAT_PRP39_C Suf HAT_Syf1_CNRKL1_N OB_RRP5_4th HAT_Syf1_CNRKL1_C TPR_14 TPR_19 UTP6_C ARM_TT21 TPR_CcmH_CycH TPR_15 ARM_TT21_5th DUF7017 DUF2110 DUF4666 NRDE-2
Other DBs
NCBI-GeneID: 105081689
NCBI-ProteinID: XP_010969272
LinkDB
Position
Unknown
AA seq 1872 aa
MANMEESFPRGGTRKTHKSEKAFQYSVEHDNLFDISTEEESTKRKKNQKRPAQAKKLKIE
KRESSKFVREKFEILNKESLCEGMRILGCVKEVNELDLVISLPNGLQGVVQVTEICDAYT
EKLNEQVAQEEPLQDLVSLPELFSPGMLVRCVVSSLSITQRGKKNIKLSLNPKNVNKVLS
AEALKSGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAQEYIRQKNKGAKLKVGQYLN
CTIEEVKGNGGVVSLSIGHSEVSAAIATEEQNWTHNNLLPGLVVKAQVQKVTPLGLTLKF
LSFFTGLVDFMHLDPKKAGTYFSNQPVKACVLCVHPQTRAVRLSLRPIFLHPGRPLPRLS
CQQLGAVLDDVPVQDFFPNTGATFRLKDGALAYAWLSHLSNSKKLFKPETFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQFLWYHDIKPGVLVKGTVLTIKPYGILVKVSKQVRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCNPEAKKLIMTLKKTLVESKLPAITCYADAK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPESVFYTGQVVKVVVLSCE
PSKERMLLSFKLSSDPKKECVGHSQKKRRAINAGQLVDVKVLEKAKDGLKVAVLPHNIPA
FLPTPHLSDHVANGPLLYHWLQAGDTLHRVLCLSEHHEHVLLCRKPALVSAVEGGQDPKS
FSEIHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKALSDKFVTSTSDHFVEGQTVVAKV
TNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLTQCLEERQGVRSLMSNRDSVLIQTLAEM
TPGMLLDLEVQEVLEDGSVLFSEGPVPGLVLRASRYHRAGQEVESGQKKKVVILNIDMLK
LEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTF
HFDSEKLQVGQGVSLTLETTEPGVTGLLLAVEGPAAKRTMRKTRKDSETVDEDEEVDPAL
IVGTIKKHTLSIGDVVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTAPTSKLK
VGKKITARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSPLEK
IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQA
LKATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPLGKVGRVSIFH
VSDSYSETPLEDFTPQKIVRCYVLSTTGPELTLSLRSSRTNPETKSKIADPEINSIQDIE
KGQLLRGYVKAVQPSGVLLSLGPSVTGLAQYPHVSQYSPAKSALYDKHLPEGKLLTAKVL
SVNHRGNLVELSFLPRDTGKPDVFPASLGLPLRKQEERETGAEERDHRGEEEKGKRKSLK
RKEKSNGQGLEEVQLPSKEKKVPQKPQAKKPGKRPHPESGSEQEQVNKKQKKAAPSEEDD
SGVEVYYREGEEEMEETSVLPKKKHPRPAEAPRLQLSSGFVWDVRLDSLTPALPPHRESS
DSEEEEKPEQATQKKSKKERELEKQKAEKELARIEEALMDPGRQPESADDFDRLVLSSPN
SSILWVQYMAFHLQATEIEKARAVAERALKTISFRAEVMVLTALPPNLENMSSSQESLTK
VFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRG
QAGASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMIIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq 5619 nt   +upstreamnt  +downstreamnt
atggcaaacatggaagaaagcttcccccgagggggtacaagaaagacccacaaatcagag
aaagctttccagtactcagttgaacatgacaacttatttgatatttctactgaagaagaa
tccaccaaaaggaaaaagaaccagaaaagaccagcacaagcaaaaaagctgaaaattgaa
aagagagaaagcagcaagtttgtaagagagaagtttgaaatccttaataaggagtcccta
tgtgaggggatgcggattctgggttgcgtgaaagaggtaaatgaactggacctggtgatt
agcctccccaatggcctccagggggttgtgcaagtgactgaaatctgtgatgcttacact
gaaaagctgaatgagcaggtggcacaagaggaacctctgcaggacctggtcagcttgcct
gagctcttctcacctggaatgctggtgagatgtgtggtgagcagtctgagcatcactcag
aggggcaaaaagaatatcaagctatctctgaaccccaaaaatgtcaacaaagtgctgagt
gctgaagccctgaaatccggcatgctgctcacaggcactgtgtccagcctggaagaccat
ggctacctagtggacattggtgttggtggggccagagcttttctgccactgcagaaagcc
caggagtacatccgacagaagaacaaaggtgctaaattgaaggtgggtcagtacctgaac
tgcaccattgaagaggtgaaaggcaacgggggagttgttagtctgtctattggtcattca
gaagtttctgctgccattgccactgaggagcaaaactggacccacaataacctgctgcca
ggattggtggtcaaagcccaggtacagaaggtgactccacttggccttacactgaaattt
ctctcattcttcactggcctggttgactttatgcacctggatcccaagaaagctggaaca
tacttctcaaatcagccagtaaaggcctgtgtcctctgtgtccatcctcagaccagagct
gtgcggctgagcctgcgccccatcttcctgcatcctgggcgcccactccctcgactctct
tgccagcagctgggagctgtgctggatgatgttcctgtccaggactttttccccaacact
ggggccaccttcaggctgaaggatggggctctggcctatgcctggctcagccatctctcc
aactctaagaaactcttcaaacctgagaccttcaagccaggaaacactcacaagtgtaga
atcattgactacagccaaatggatgaactcgctttactctctctgcggacgtctattatt
gaagctcagttcctttggtatcatgacatcaaacctggggtcttggtaaagggcacggtg
ctgaccataaagccatacgggatactggtgaaggtgagcaagcaagtcagaggcctggta
ccccctatgcacctggctgacatccttatgaagaatccagagaagaagtaccacattggg
gatgaagtcaagtgccgggttttactttgtaaccctgaagccaagaagctgataatgacc
ctgaagaagaccctggttgaatccaaactgcctgccattacctgctatgctgatgccaag
cctgggctgcagacacatggctttatcctcagggtcaaggactatggctgcattgtgaaa
ttctacaatgatgtgcagggactggtgcccaagcatgagctcagtgccgagtatgtccct
gacccagagagtgtcttttacactggccaggtggtgaaggttgtggtgctgagctgtgag
ccatccaaagagaggatgctcttgtcatttaagctgtcaagtgatccaaagaaagagtgt
gtgggacacagtcagaaaaaaagaagagccattaacgccgggcagttggtggatgtgaag
gttttagagaaggccaaagatgggctgaaggtggctgtcctgccccacaacatccctgcc
ttcctccctacgcctcatctgtcagaccacgttgccaatggcccactgttgtatcactgg
ctccaggcgggcgacacccttcacagagtcctgtgtctgagcgagcatcacgaacacgtt
ctcctttgcaggaagccagctttggtctctgcagtagagggtggccaggatcccaagagc
ttctcagaaatccatcccggaatgctgctcattggttttgtgaagagcatcaaggactac
ggtgtgttcgtccagttcccctcaggtcttagtggactggcccccaaggctttgagtgac
aagtttgtgacctccacaagtgaccactttgtcgaggggcagacggtggtggcgaaggtg
accaatgtggacgaggagaagcagcggatgctgctgtcactgcggctgtcggactgcacc
ctgggggacctggccaccaccagcctcctcctcctgacgcagtgcctggaggagcggcag
ggtgtccgtagcctcatgagcaaccgagactctgtgttgatccagacgctggccgagatg
actccagggatgctccttgacctagaggttcaggaggtgttggaagatggctctgtgctg
ttcagtgagggcccagtgcccggcctggtgctgagggccagcaggtatcatcgggcaggg
caggaggtggaatctgggcagaaaaagaaggttgtaatcttaaacattgacatgttgaag
ttggaagtacatgtttctctctgccatgatttggtgaatagaaaagctaaaaagctgaag
aaaggcagtgagcaccaggcgatcgtgcagcacttggaggagtcctttgctgttgcctcc
ttggtagagactggccacctagcagctttctccctgacctctcacctcaatgacaccttc
cactttgactcagaaaagttgcaggtgggacagggtgtctctttaaccctcgagaccaca
gaaccgggagtgaccggtcttcttttggccgttgaggggccagctgctaagaggaccatg
agaaagacccggaaggactctgagacagtcgacgaggatgaggaagtggatccagctctg
attgtagggactataaagaagcacaccctgtccattggggacgtggtcacagggactgtc
aagtccattaagcccacccatgtggttgtgaccctggaagatggcatcattggctgtatc
cacgcctcccacattctcgatgatgttccagtggggacagctcctacctccaagctgaaa
gttgggaaaaagatcactgcccgagtgattggcgggagagacatgaagacattcaagttt
ctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgtccggccaagt
gagctggagaaggatggccacactgctctcaacactcactctgttagccccttggagaag
attaaacagtaccaggctggtcagaccgtgacttgcttcttaaagaagtacaatgtggtt
aagaaatggcttgaggtggagattgctccagacatcagagggagaattccgttgttgctc
acttctcttagcttcaaggttctgaaacatccagataagaagttccggattggccaggcc
ctgaaggccactgtggttggcccagattcctccaaggccttcttgtgtctctcactcata
ggtcctcacaagcttgagaaaggggaagtggccatgggccgagtagtgaaggtgactccc
aaggaggggctgaccgtctccttccccctcgggaaggtgggaagagttagtatatttcat
gtgagtgactcctactcagagacgcccctggaagactttaccccacagaagattgtcagg
tgttacgtcctgtccaccacgggtcctgagttgactttgtcgctgcgatcgtccaggacg
aacccggagacgaaaagcaaaatagcagaccctgagattaactccatccaggacattgag
aaagggcagctcctgaggggctacgtgaaggccgtccagccgtccggtgtgctcctcagc
ctcggtccctcagttacgggtttggcccagtacccgcacgtgtcccagtacagcccagcc
aagagtgccctgtatgacaaacacctccccgaagggaagctgctcacagccaaggtccta
agcgtgaaccaccgggggaacctggtagagctgtcattcctcccccgcgacactgggaag
ccggacgtgtttcctgcctccctaggactgcccctccgaaagcaggaggagagggaaaca
ggggcagaggagagagaccacagaggagaagaagagaaggggaaaaggaagagtctgaag
aggaaggagaagagtaatggccagggcctggaggaggtgcagctgcccagcaaggagaag
aaggtgccccagaaaccgcaggcaaagaagccgggcaagcggccacacccggagtctgga
agtgagcaggaacaagtgaacaagaagcaaaagaaagctgctccatctgaggaggatgac
agtggtgtcgaagtgtattaccgggaaggggaagaggagatggaggagacgagtgtgctg
cccaagaagaagcaccccaggccagcagaagcaccccggctgcagctgtcctctggcttc
gtttgggacgtgaggctggactctctgaccccggccttgccacctcacagggagagctca
gacagcgaggaggaagagaagccagagcaagccacgcagaagaaaagcaagaaggaaagg
gagctggagaagcagaaggcggagaaagagctggcccgcatagaggaggcgctgatggac
cctgggcgacagccggagtcggcggatgactttgaccgacttgtactaagctcccccaac
agctccatcctgtgggtgcagtacatggccttccacctgcaggccacggagatcgagaag
gcccgggctgtggccgagagggcactcaagaccatctccttcagggctgaggtgatggtg
ctgactgctctccctcctaacctggagaacatgtccagctcccaggagtccctgaccaag
gtcttcgagcgggccgtgcagtacaatgagccactgaaggtctttctccacctggctgac
atctacaccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaag
cgtttccggcaggagaaagctgtctggatcaaatacggtgcctttcttctgcggagaggc
caagctggagccagtcaccgtgtgatgcagcgagccctcgagtgcctgcccaagaaagag
cacgtggatgtgattgccaagtttgcccagcttgagttccagctgggggatgcagagcgg
gccaaagccattttcgagaatacactgagcacctacccaaagcgcacggatgtctggtcg
gtctacattgacatgatcatcaagcatggcagccagaaggaagtccgggacatctttgag
cgggtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaagcgctacctg
gactacgagaagcaacacggcaccgagaaggacgtgcaggcagtaaaggctaaggccctg
gaatacgtggaggctaagagctccgtgttggaggactag

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