Camelus bactrianus (Bactrian camel): 105081689
Help
Entry
105081689 CDS
T07534
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
cbai
Camelus bactrianus (Bactrian camel)
Brite
KEGG Orthology (KO) [BR:
cbai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbai03009
]
105081689 (PDCD11)
Ribosome biogenesis [BR:
cbai03009
]
Eukaryotic type
90S particles
Other 90S particles
105081689 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
HAT_PRP39_N
OB_RRP5
Spt6_S1
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
OB_RRP5_4th
HAT_Syf1_CNRKL1_C
TPR_14
TPR_19
UTP6_C
ARM_TT21
TPR_CcmH_CycH
TPR_15
ARM_TT21_5th
DUF7017
DUF2110
DUF4666
NRDE-2
Motif
Other DBs
NCBI-GeneID:
105081689
NCBI-ProteinID:
XP_010969272
LinkDB
All DBs
Position
Unknown
AA seq
1872 aa
AA seq
DB search
MANMEESFPRGGTRKTHKSEKAFQYSVEHDNLFDISTEEESTKRKKNQKRPAQAKKLKIE
KRESSKFVREKFEILNKESLCEGMRILGCVKEVNELDLVISLPNGLQGVVQVTEICDAYT
EKLNEQVAQEEPLQDLVSLPELFSPGMLVRCVVSSLSITQRGKKNIKLSLNPKNVNKVLS
AEALKSGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAQEYIRQKNKGAKLKVGQYLN
CTIEEVKGNGGVVSLSIGHSEVSAAIATEEQNWTHNNLLPGLVVKAQVQKVTPLGLTLKF
LSFFTGLVDFMHLDPKKAGTYFSNQPVKACVLCVHPQTRAVRLSLRPIFLHPGRPLPRLS
CQQLGAVLDDVPVQDFFPNTGATFRLKDGALAYAWLSHLSNSKKLFKPETFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQFLWYHDIKPGVLVKGTVLTIKPYGILVKVSKQVRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCNPEAKKLIMTLKKTLVESKLPAITCYADAK
PGLQTHGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPESVFYTGQVVKVVVLSCE
PSKERMLLSFKLSSDPKKECVGHSQKKRRAINAGQLVDVKVLEKAKDGLKVAVLPHNIPA
FLPTPHLSDHVANGPLLYHWLQAGDTLHRVLCLSEHHEHVLLCRKPALVSAVEGGQDPKS
FSEIHPGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKALSDKFVTSTSDHFVEGQTVVAKV
TNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLTQCLEERQGVRSLMSNRDSVLIQTLAEM
TPGMLLDLEVQEVLEDGSVLFSEGPVPGLVLRASRYHRAGQEVESGQKKKVVILNIDMLK
LEVHVSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTF
HFDSEKLQVGQGVSLTLETTEPGVTGLLLAVEGPAAKRTMRKTRKDSETVDEDEEVDPAL
IVGTIKKHTLSIGDVVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPVGTAPTSKLK
VGKKITARVIGGRDMKTFKFLPISHPRFIRTIPELSVRPSELEKDGHTALNTHSVSPLEK
IKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRIGQA
LKATVVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPKEGLTVSFPLGKVGRVSIFH
VSDSYSETPLEDFTPQKIVRCYVLSTTGPELTLSLRSSRTNPETKSKIADPEINSIQDIE
KGQLLRGYVKAVQPSGVLLSLGPSVTGLAQYPHVSQYSPAKSALYDKHLPEGKLLTAKVL
SVNHRGNLVELSFLPRDTGKPDVFPASLGLPLRKQEERETGAEERDHRGEEEKGKRKSLK
RKEKSNGQGLEEVQLPSKEKKVPQKPQAKKPGKRPHPESGSEQEQVNKKQKKAAPSEEDD
SGVEVYYREGEEEMEETSVLPKKKHPRPAEAPRLQLSSGFVWDVRLDSLTPALPPHRESS
DSEEEEKPEQATQKKSKKERELEKQKAEKELARIEEALMDPGRQPESADDFDRLVLSSPN
SSILWVQYMAFHLQATEIEKARAVAERALKTISFRAEVMVLTALPPNLENMSSSQESLTK
VFERAVQYNEPLKVFLHLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRG
QAGASHRVMQRALECLPKKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMIIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
EYVEAKSSVLED
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacatggaagaaagcttcccccgagggggtacaagaaagacccacaaatcagag
aaagctttccagtactcagttgaacatgacaacttatttgatatttctactgaagaagaa
tccaccaaaaggaaaaagaaccagaaaagaccagcacaagcaaaaaagctgaaaattgaa
aagagagaaagcagcaagtttgtaagagagaagtttgaaatccttaataaggagtcccta
tgtgaggggatgcggattctgggttgcgtgaaagaggtaaatgaactggacctggtgatt
agcctccccaatggcctccagggggttgtgcaagtgactgaaatctgtgatgcttacact
gaaaagctgaatgagcaggtggcacaagaggaacctctgcaggacctggtcagcttgcct
gagctcttctcacctggaatgctggtgagatgtgtggtgagcagtctgagcatcactcag
aggggcaaaaagaatatcaagctatctctgaaccccaaaaatgtcaacaaagtgctgagt
gctgaagccctgaaatccggcatgctgctcacaggcactgtgtccagcctggaagaccat
ggctacctagtggacattggtgttggtggggccagagcttttctgccactgcagaaagcc
caggagtacatccgacagaagaacaaaggtgctaaattgaaggtgggtcagtacctgaac
tgcaccattgaagaggtgaaaggcaacgggggagttgttagtctgtctattggtcattca
gaagtttctgctgccattgccactgaggagcaaaactggacccacaataacctgctgcca
ggattggtggtcaaagcccaggtacagaaggtgactccacttggccttacactgaaattt
ctctcattcttcactggcctggttgactttatgcacctggatcccaagaaagctggaaca
tacttctcaaatcagccagtaaaggcctgtgtcctctgtgtccatcctcagaccagagct
gtgcggctgagcctgcgccccatcttcctgcatcctgggcgcccactccctcgactctct
tgccagcagctgggagctgtgctggatgatgttcctgtccaggactttttccccaacact
ggggccaccttcaggctgaaggatggggctctggcctatgcctggctcagccatctctcc
aactctaagaaactcttcaaacctgagaccttcaagccaggaaacactcacaagtgtaga
atcattgactacagccaaatggatgaactcgctttactctctctgcggacgtctattatt
gaagctcagttcctttggtatcatgacatcaaacctggggtcttggtaaagggcacggtg
ctgaccataaagccatacgggatactggtgaaggtgagcaagcaagtcagaggcctggta
ccccctatgcacctggctgacatccttatgaagaatccagagaagaagtaccacattggg
gatgaagtcaagtgccgggttttactttgtaaccctgaagccaagaagctgataatgacc
ctgaagaagaccctggttgaatccaaactgcctgccattacctgctatgctgatgccaag
cctgggctgcagacacatggctttatcctcagggtcaaggactatggctgcattgtgaaa
ttctacaatgatgtgcagggactggtgcccaagcatgagctcagtgccgagtatgtccct
gacccagagagtgtcttttacactggccaggtggtgaaggttgtggtgctgagctgtgag
ccatccaaagagaggatgctcttgtcatttaagctgtcaagtgatccaaagaaagagtgt
gtgggacacagtcagaaaaaaagaagagccattaacgccgggcagttggtggatgtgaag
gttttagagaaggccaaagatgggctgaaggtggctgtcctgccccacaacatccctgcc
ttcctccctacgcctcatctgtcagaccacgttgccaatggcccactgttgtatcactgg
ctccaggcgggcgacacccttcacagagtcctgtgtctgagcgagcatcacgaacacgtt
ctcctttgcaggaagccagctttggtctctgcagtagagggtggccaggatcccaagagc
ttctcagaaatccatcccggaatgctgctcattggttttgtgaagagcatcaaggactac
ggtgtgttcgtccagttcccctcaggtcttagtggactggcccccaaggctttgagtgac
aagtttgtgacctccacaagtgaccactttgtcgaggggcagacggtggtggcgaaggtg
accaatgtggacgaggagaagcagcggatgctgctgtcactgcggctgtcggactgcacc
ctgggggacctggccaccaccagcctcctcctcctgacgcagtgcctggaggagcggcag
ggtgtccgtagcctcatgagcaaccgagactctgtgttgatccagacgctggccgagatg
actccagggatgctccttgacctagaggttcaggaggtgttggaagatggctctgtgctg
ttcagtgagggcccagtgcccggcctggtgctgagggccagcaggtatcatcgggcaggg
caggaggtggaatctgggcagaaaaagaaggttgtaatcttaaacattgacatgttgaag
ttggaagtacatgtttctctctgccatgatttggtgaatagaaaagctaaaaagctgaag
aaaggcagtgagcaccaggcgatcgtgcagcacttggaggagtcctttgctgttgcctcc
ttggtagagactggccacctagcagctttctccctgacctctcacctcaatgacaccttc
cactttgactcagaaaagttgcaggtgggacagggtgtctctttaaccctcgagaccaca
gaaccgggagtgaccggtcttcttttggccgttgaggggccagctgctaagaggaccatg
agaaagacccggaaggactctgagacagtcgacgaggatgaggaagtggatccagctctg
attgtagggactataaagaagcacaccctgtccattggggacgtggtcacagggactgtc
aagtccattaagcccacccatgtggttgtgaccctggaagatggcatcattggctgtatc
cacgcctcccacattctcgatgatgttccagtggggacagctcctacctccaagctgaaa
gttgggaaaaagatcactgcccgagtgattggcgggagagacatgaagacattcaagttt
ctcccaataagtcatcccagatttattcgaaccatcccggagctgagtgtccggccaagt
gagctggagaaggatggccacactgctctcaacactcactctgttagccccttggagaag
attaaacagtaccaggctggtcagaccgtgacttgcttcttaaagaagtacaatgtggtt
aagaaatggcttgaggtggagattgctccagacatcagagggagaattccgttgttgctc
acttctcttagcttcaaggttctgaaacatccagataagaagttccggattggccaggcc
ctgaaggccactgtggttggcccagattcctccaaggccttcttgtgtctctcactcata
ggtcctcacaagcttgagaaaggggaagtggccatgggccgagtagtgaaggtgactccc
aaggaggggctgaccgtctccttccccctcgggaaggtgggaagagttagtatatttcat
gtgagtgactcctactcagagacgcccctggaagactttaccccacagaagattgtcagg
tgttacgtcctgtccaccacgggtcctgagttgactttgtcgctgcgatcgtccaggacg
aacccggagacgaaaagcaaaatagcagaccctgagattaactccatccaggacattgag
aaagggcagctcctgaggggctacgtgaaggccgtccagccgtccggtgtgctcctcagc
ctcggtccctcagttacgggtttggcccagtacccgcacgtgtcccagtacagcccagcc
aagagtgccctgtatgacaaacacctccccgaagggaagctgctcacagccaaggtccta
agcgtgaaccaccgggggaacctggtagagctgtcattcctcccccgcgacactgggaag
ccggacgtgtttcctgcctccctaggactgcccctccgaaagcaggaggagagggaaaca
ggggcagaggagagagaccacagaggagaagaagagaaggggaaaaggaagagtctgaag
aggaaggagaagagtaatggccagggcctggaggaggtgcagctgcccagcaaggagaag
aaggtgccccagaaaccgcaggcaaagaagccgggcaagcggccacacccggagtctgga
agtgagcaggaacaagtgaacaagaagcaaaagaaagctgctccatctgaggaggatgac
agtggtgtcgaagtgtattaccgggaaggggaagaggagatggaggagacgagtgtgctg
cccaagaagaagcaccccaggccagcagaagcaccccggctgcagctgtcctctggcttc
gtttgggacgtgaggctggactctctgaccccggccttgccacctcacagggagagctca
gacagcgaggaggaagagaagccagagcaagccacgcagaagaaaagcaagaaggaaagg
gagctggagaagcagaaggcggagaaagagctggcccgcatagaggaggcgctgatggac
cctgggcgacagccggagtcggcggatgactttgaccgacttgtactaagctcccccaac
agctccatcctgtgggtgcagtacatggccttccacctgcaggccacggagatcgagaag
gcccgggctgtggccgagagggcactcaagaccatctccttcagggctgaggtgatggtg
ctgactgctctccctcctaacctggagaacatgtccagctcccaggagtccctgaccaag
gtcttcgagcgggccgtgcagtacaatgagccactgaaggtctttctccacctggctgac
atctacaccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaag
cgtttccggcaggagaaagctgtctggatcaaatacggtgcctttcttctgcggagaggc
caagctggagccagtcaccgtgtgatgcagcgagccctcgagtgcctgcccaagaaagag
cacgtggatgtgattgccaagtttgcccagcttgagttccagctgggggatgcagagcgg
gccaaagccattttcgagaatacactgagcacctacccaaagcgcacggatgtctggtcg
gtctacattgacatgatcatcaagcatggcagccagaaggaagtccgggacatctttgag
cgggtcattcacctgagcctggcccccaagcgaatgaaattcttcttcaagcgctacctg
gactacgagaagcaacacggcaccgagaaggacgtgcaggcagtaaaggctaaggccctg
gaatacgtggaggctaagagctccgtgttggaggactag
DBGET
integrated database retrieval system