Camelus bactrianus (Bactrian camel): 105081966
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Entry
105081966 CDS
T07534
Symbol
SCN1A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 1 subunit alpha
KO
K04833
voltage-gated sodium channel type I alpha
Organism
cbai
Camelus bactrianus (Bactrian camel)
Pathway
cbai04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
cbai00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
105081966 (SCN1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cbai04040
]
105081966 (SCN1A)
Ion channels [BR:
cbai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
105081966 (SCN1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
FUT8_N_cat
Pns11_12
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
105081966
NCBI-ProteinID:
XP_010969709
UniProt:
A0A9W3FBS9
LinkDB
All DBs
Position
Unknown
AA seq
1994 aa
AA seq
DB search
MEQTVLVPPGPDSFSFFTRESLAAIERRIAEEKAKNPKPDKNDDENGPKPNSDLEAGKNL
PFIYGDIPPEMVSEPLEDLDPYYVNKKTFIVLNKGKAIFRFSATSALYILTPFNPLRKIA
IKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKIIARGFCLE
DFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVQWPPTNASLEEHSVEKNVTMNYN
GTLVNETFIEFDWKSYIQDSRYHYFLEGFSDALLCGNSSDAGQCPEGYMCVKAGRNPNYG
YTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAV
VAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEAAQQAAAITASEHSREPSAAGRLSD
SSSEASKLSSKSAKERRNRRKKRKQKEQSGGEEKDDDEFHKSESEDSIRRKGFRFSIEGN
RLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDN
ESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAMLPANGKMHSTVDCNGVVSLVGGPSVPT
SPVGQLLPEGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIASILTNTVEELEESRQ
KCPPCWYKFSNIFLIWDCSPYWLKVKHIVNLVVMDPFVDLAITICIVLNTLFMAMEHYPM
TDHFNNVLTVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLVELGLANV
EGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLF
GKSYKDCVCKINSECKLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLTVF
MMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDNEMNNLQIAVDRMHKGIAFVKRKIYE
FIQQSFVRKQKILDEIKPLDDLNNKKDSCMSNHTTEIGKDLDYLKDVNGTTSGIGTGSSV
EKYIIDESDYMSFINNPSLTVTVPIAVGESDFENLNTEDFSSESDLEESKEKLNESSSSS
EGSTVDIGAPAEEQPVMEPEETLEPEACFTEGCVQRFKCCQISVEEGRGKQWWNLRRTCF
RIVEHNWFETFIVFMILLSSGALAFEDIYIDQRKTIKTMLEYADKVFTYIFILEMLLKWV
AYGYQTYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSRFEG
MRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTGDMFDIEEVNN
HSDCLILIERNETARWKNVKVNFDNVGFGYLSLLQVATFKGWMDIMYAAVDSRNVELQPK
YEESLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMK
KLGSKKPQKPIPRPGNKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETDDQSEYVTSI
LSRINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYFVSP
TLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNF
AYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPNKVNPGSSV
KGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVW
EKFDPDATQFMEFEKLSQFAAALEPPLNLPQPNKLQLIAMDLPMVSGDRIHCLDILFAFT
KRVLGESXALRIQMEDRFMASNPSKVSYQPITTTLKRKQEEVSAVIIQRAYRRHLLKRTV
KQASFTYNKNKIKGGANLLVKEDMIIDRINENSITEKTDLTMSTAACPPSYDRVTKPIVE
KHEQEGKDEKAKGK
NT seq
5985 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacagtgcttgtaccaccaggacctgacagcttcagcttcttcaccagagaa
tctcttgcggctattgaaagacgcattgcagaagaaaaggctaagaaccccaaaccagac
aagaatgatgatgagaatggcccaaagccaaacagtgacttggaagccggaaagaacctt
ccatttatttatggagacatccctccagagatggtgtcagagccgctggaggacctggac
ccgtactatgtcaataagaaaacttttatagtattgaataaagggaaggccatcttccgg
ttcagtgccacctctgccctgtacattttaactcccttcaatcctcttaggaaaatagct
attaagattttggtacattcattattcagcatgctaattatgtgcactattttgacgaac
tgtgtgtttatgacaatgagtaatcctcctgactggacaaagaatgtagagtacaccttc
acaggaatatacacttttgaatcacttataaaaattattgcaaggggcttctgtttagaa
gattttactttccttcgcgacccatggaactggctcgacttcaccgtcattacatttgca
tatgtgacagagtttgtggacctgggcaatgtctcagcattgagaacattcagagttctc
cgagcactgaaaaccatttcagtcattccaggcctgaagaccatcgtgggggccctgatc
cagtcagtgaagaagctctcggatgtcatgatcctgactgtgttctgtctgagcgtgttt
gctctgatagggctgcagctcttcatgggcaacctgcggaataagtgtgtacagtggcct
cccaccaatgcttccctggaggaacatagtgtagagaagaatgtaactatgaattacaat
ggcacgcttgtaaacgaaacgttcattgagtttgactggaagtcatacattcaagattca
agatatcattattttctggagggtttttcagatgcacttctatgtggaaatagctctgat
gcaggccaatgtccggaaggctacatgtgtgtgaaagctggtagaaatcccaattatggc
tacacaagcttcgataccttcagttgggcttttttgtctctgtttcgactcatgactcag
gacttctgggaaaatctttaccaattgacattacgtgctgctgggaaaacatacatgata
ttttttgtgctggtcattttcttgggctcattctatctaataaatttgatcctggctgtg
gtggccatggcctatgaggaacagaatcaggccaccttggaagaggcagaacagaaagag
gctgaatttcagcagatgctcgaacagctgaaaaagcaacaggaggcagctcagcaggca
gcagctataactgcctcagagcattccagagaacccagcgcagcaggcaggctctcagac
agctcatctgaagcctccaaattgagttccaagagtgctaaggaaagaagaaatcggaga
aagaaaagaaaacagaaggagcagtcgggtggagaagagaaggatgatgatgaattccat
aaatctgaatctgaagacagcatccggaggaaagggtttcgcttctccatcgaagggaat
cggttgacatatgaaaagaggtactcctccccacaccagtctttgttgagcatccgtggc
tccttattttctccaagacgaaacagccgaacaagccttttcagcttcagagggcgggca
aaggatgtgggctcagagaatgactttgccgatgatgagcacagcacctttgaggacaac
gagagccgcagagactccttgtttgtgcccagacgacacggagagcgacgcaacagcaac
ctaagccagaccagtaggtcgtcccggatgctggccatgcttccagcgaatgggaagatg
cacagcactgtggactgcaacggtgtggtttccttggttggtggaccttcagtgcctaca
tcgcctgttggacagcttctgccagagggaacaaccaccgaaactgaaatgagaaagaga
aggtcaagttcttttcatgtttccatggactttctagaagatccttcccaaaggcaaaga
gcaatgagtatagccagcattttaacaaatacagtagaagagcttgaagaatccaggcag
aaatgcccaccctgttggtataagttttccaacatattcttaatctgggactgttcacca
tattggttaaaagtgaaacatattgtcaacctggtcgtgatggacccatttgttgacctg
gccatcaccatctgcattgtcttaaataccctcttcatggccatggagcactatcccatg
acggaccattttaataatgtgcttacagtaggaaacttggttttcactgggatctttaca
gcagaaatgtttctgaaaattattgccatggatccttactattatttccaagaaggctgg
aatatctttgatggttttattgtaacgcttagcctggtagaacttggtctggccaacgtg
gaaggattatctgttctccgttcattccgattgctccgagttttcaagttggcaaaatct
tggccaacattaaatatgctaataaagatcattggcaattcggtgggagctctgggaaat
ctaaccttggtgttggccatcatcgtcttcattttcgccgtggttggcatgcaacttttt
ggtaaaagctacaaagattgtgtctgcaagatcaacagcgagtgtaaactcccacgctgg
cacatgcatgacttcttccactccttcctgattgtgttccgggttctgtgtggagaatgg
atagagaccatgtgggactgcatggaggttgccggtcaagccatgtgcctcactgtcttc
atgatggtcatggtgattggaaacctagtggtcctgaacctctttttggccttgcttctg
agctcatttagtgcagacaaccttgcagccactgatgatgataatgaaatgaacaatctc
caaattgccgtggataggatgcacaagggaatagcttttgtgaagagaaagatatatgaa
tttattcaacagtccttcgttagaaaacaaaagattttagatgaaattaagccacttgat
gatctaaacaacaagaaagacagttgtatgtccaatcatacaacagaaattgggaaagat
cttgactatcttaaagatgtaaatggtaccacaagtggaataggaactggcagcagtgtt
gaaaaatacatcattgatgaaagtgactacatgtcattcataaacaatcccagtcttaca
gtgactgtaccaattgctgtaggagagtctgactttgaaaatttaaacacagaggacttc
agtagtgaatcagatctggaagaaagcaaagagaaacttaatgaaagcagtagctcctct
gaaggcagcactgtggacattggagcgcctgcagaggaacagcctgtaatggaacctgag
gaaacccttgaacctgaagcctgtttcactgaaggttgtgtacaaagattcaagtgttgt
caaatcagtgtggaagaagggagaggaaaacaatggtggaacctgagaagaacgtgtttc
cgaatagttgagcataactggtttgagaccttcattgttttcatgattctccttagtagt
ggtgctctggcatttgaggatatctatattgatcaacgaaagacgatcaagacaatgttg
gaatatgctgacaaggttttcacttacattttcattctggaaatgcttctaaaatgggtg
gcatatggctatcaaacatatttcaccaatgcctggtgttggctggacttcttaattgtt
gatgtttcacttgtcagtttaacagcaaatgccttgggttactcagaacttggtgccatc
aaatctctcaggacactaagagctctgagacctctgagagccttatcacgatttgaaggg
atgagggtggttgtgaatgcccttttaggagcaattccatccatcatgaatgtgcttctg
gtttgtcttatattctggctaattttcagcatcatgggcgtaaatttgtttgctggcaaa
ttctaccactgtgttaacaccacaactggtgacatgtttgacatcgaagaagtgaataat
cattctgattgcctaatactgatagaaagaaatgagactgcccgatggaaaaatgtgaaa
gtaaactttgataatgtaggatttgggtatctctctttgcttcaagttgccacctttaag
ggatggatggatataatgtacgcagctgttgattcacgaaatgtggaactccagccgaag
tatgaggaaagtctatacatgtatctttactttgttattttcatcatctttgggtccttc
ttcaccctgaacctgtttattggtgtcatcatagataatttcaaccagcaaaaaaagaag
ttcggaggtcaagacatctttatgacagaagaacagaagaaatactataatgcaatgaaa
aaattaggatcaaaaaagccacagaagcctatacctcgaccaggaaacaaatttcaagga
atggtctttgactttgtaaccagacaagtctttgacataagcatcatgattctcatctgt
ctcaacatggtcacaatgatggtggaaactgatgaccagagtgaatatgtgacgagcatt
ttgtcacgcatcaacctggtgttcattgtgctgttcactggagagtgtgtgttgaagctc
atctccctccgacattattattttaccataggctggaatatttttgattttgtggttgtc
attctctccattgtaggcatgtttctggctgagctgatagagaaatattttgtgtcccct
accctgttccgagtgatccgtctcgccaggataggccgaatcctgcgtctgatcaaaggg
gcgaaggggatccgcacgctgctctttgctttgatgatgtcccttcctgcgctgtttaac
atcggcctcctgctcttcctggtcatgttcatctacgccatctttggcatgtccaacttc
gcctatgttaagagggaagttggaattgatgacatgttcaactttgagaccttcggcaac
agcatgatctgcctgttccagatcaccacctctgctggctgggatgggttgctagcacct
attctcaacagtaaaccacccgactgtgaccctaataaagttaaccctggcagctcagtt
aagggagactgtgggaacccctctgttgggattttcttttttgtcagttacatcatcata
tcgtttctggttgtggtgaacatgtacatcgctgtcatcctggagaacttcagtgttgct
actgaagaaagtgcagagcccctgagtgaggatgactttgagatgttctacgaggtttgg
gagaagtttgatccggatgccacccagttcatggaatttgaaaaactgtctcagtttgca
gctgctcttgaacctcccctcaatctgccacaaccgaacaaactccagcttattgccatg
gatttgcccatggtaagtggtgaccgaatccactgtcttgacatcttatttgcttttacg
aagcgggttctaggggagagtnntgctcttcgaatacagatggaagatcgattcatggct
tccaacccatcaaaggtctcctatcagccaataactacaactttaaaaagaaaacaagag
gaggtgtccgctgttattattcagcgtgcttacaggcgccaccttttaaaacgaactgta
aaacaagcttcatttacgtataataaaaataaaatcaaaggtggggctaatcttcttgta
aaagaagacatgataattgaccgaataaatgaaaactctattacagaaaaaactgatctg
accatgtccacagcagcttgtccaccctcctatgatcgggtaacaaagccaattgtggag
aaacatgagcaggaaggcaaagatgaaaaagccaaaggcaagtaa
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integrated database retrieval system
