Camelus bactrianus (Bactrian camel): 105082686
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Entry
105082686 CDS
T07534
Symbol
UPF1
Name
(RefSeq) regulator of nonsense transcripts 1
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
cbai
Camelus bactrianus (Bactrian camel)
Pathway
cbai03013
Nucleocytoplasmic transport
cbai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105082686 (UPF1)
03015 mRNA surveillance pathway
105082686 (UPF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbai03019
]
105082686 (UPF1)
Enzymes [BR:
cbai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105082686 (UPF1)
5.6.2.5 RNA 5'-3' helicase
105082686 (UPF1)
Messenger RNA biogenesis [BR:
cbai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
105082686 (UPF1)
mRNA cycle factors
Common to processing body (P body) and stress granule
105082686 (UPF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
NPHP3_N
ATPase
nSTAND3
Helicase_RecD
DEAD
AAA_16
UvrD-helicase
SRP54
UvrD_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
105082686
NCBI-ProteinID:
XP_010970606
UniProt:
A0A9W3H4F7
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MPPLRRPIVLKLMLVTGEVDGDWPELAPRDAGVGTTLGLDVEAGWMTSAIHADFGQVGGP
EGILQNGAVDDSVAKTSQLLAELNFEEDEEDTYYTKDLPVHACSYCGIHDPACVVYCNTS
KKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHKDGPLGETVLECYNCGCRHVFLLGFIPAK
ADSVVVLLCRQPCASQSSLKDINWDSSQWQPLIQDRCFLSWLVKIPSEQEQLRARQITAQ
QINKLEELWKENPSATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKL
KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLAPLWKGIGHV
IKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALKTFAVDETSVSGY
IYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQGPPGTGKTV
TSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQTGLKVVRLCAKSREAIDSPVSFLA
LHNQIRNMDSMPELQKLQQLKDETGELSSADEKRYRALKRTAERELLMNADVICCTCVGA
GDPRLAKMQFRSILIDESTQATEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAAKAGL
SQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWP
QPDKPMFFYVTQGQEEIASSGTSYLNRTEAANVEKITTKLLKAGAKPDQIGIITPYEGQR
SYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQGIGFLNDPRRLN
VALTRARYGVIIVGNPKALSKQPLWNHLLNYYKEQKVLVEGPLNNLRESLMQFSKPRKLV
NTINPGARFMTTAMYDAREAIIPGSVYDRSSQGRPSNMYFQTHDQIGMISAGPSHVAAMN
IPIPFNLVMPPMPPPGYFGQANGPAAGRGTPKGKTGRGGRQKNRFGLPGPSQTNLPNSQA
SQDVASQPFSQGALTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDST
YQGERAYQHGGVTGLSQY
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgccccccctcaggagacccattgtccttaagctcatgttagtgactggagaggtggac
ggggactggcctgagctggccccgcgggatgcgggtgtgggtacaacgttgggcctggat
gtggaggcagggtggatgacctccgccatccatgccgattttggccaggtcggtgggcct
gagggcatcctgcagaacggggctgtggatgacagcgtggccaagaccagccagttgttg
gctgagttgaacttcgaagaagatgaggaagatacctattacacgaaggacctccccgta
catgcctgcagttactgcggaatacacgatcctgcctgcgtggtttactgtaataccagc
aagaagtggttctgtaatggacgtggaaatacttctggcagccacattgtaaatcacctc
gtgagggcaaaatgcaaagaggtgactctacacaaggatgggcccctgggggagacggtt
ctggagtgttacaattgcggctgccgccacgtcttcctccttggcttcatccctgccaag
gctgactcggtggtggtgctgctgtgcaggcagccctgtgccagtcagagcagcctcaag
gacatcaactgggacagctcacagtggcagcccctgatccaggaccgttgcttcctgtcc
tggctggtcaagattccttctgagcaggagcagctgcgggcccggcagatcaccgcgcag
cagatcaacaagctggaggagctctggaaggaaaatccgtctgccaccttggaggacctg
gagaagccaggagtggatgaggagccacagcatgtcctcctgcggtatgaggatgcttac
cagtaccagaacatattcggccctctggtcaagctggaggccgactacgataagaaacta
aaggagtcccagactcaagataacatcacggtcaggtgggacctgggccttaacaagaag
agaatcgcctacttcactttgcccaagactgactctgacatgcggctcatgcagggggac
gagatatgcctgcggtacaaaggggacctggcgcccttgtggaaagggatcggccacgtt
atcaaggtccctgataattatggtgatgagattgccattgagcttcggagcagtgtgggc
gcgcccgtggaggtgactcataacttccaagtggattttgtgtggaagtcaacctcattc
gacaggatgcagagtgcattgaaaacctttgctgtggatgagacctccgtgtcgggctac
atctaccataagctgctcggccacgaggtggaggatgtgatcatcaagtgccagctgccc
aagcgcttcacggcacaggggctccctgacctcaaccactctcaggtttatgccgtcaag
actgtgctacagagaccactgagcctgatccagggaccaccgggcacaggaaagacagtg
acctcagccaccatcgtctaccacctggctcggcaaggcaatgggcctgtgctcgtctgt
gctccaagcaacatagctgtggatcagctgactgagaagatccaccagaccgggctgaaa
gttgtgcggctctgtgcaaagagccgtgaggctattgactccccggtgtccttcctggcc
ctgcacaaccagatcagaaacatggacagcatgccagagctccagaagctgcagcagctg
aaggatgagactggggagctgtcgtccgcagatgagaagcggtaccgggccctgaagcgc
actgctgagagggagctgctcatgaacgctgatgtcatctgttgcacgtgcgtgggcgcg
ggggacccgaggcttgccaagatgcagttccgctccattttaatcgatgaaagcacccag
gccaccgagccagagtgcatggtccccgtggtccttggagccaagcagctgatccttgtg
ggtgaccactgccagctgggccccgtggtgatgtgcaagaaggcggccaaggccgggctg
tcccagtcactcttcgagcgcctggtggtgctgggcatccgtcccatccgcctccaggtc
cagtatcggatgcaccctgcgctcagtgccttcccatccaacatcttctacgagggctct
cttcagaacggtgtcactgcagcggatcgtgtgaagaagggctttgacttccagtggccc
caaccagataaaccgatgttcttctacgtgacccagggccaagaggagattgccagctca
ggcacctcctacctgaacaggacggaggctgcaaatgtggagaagatcaccacgaagctg
ttgaaggcaggtgccaagccagaccagatcggcatcatcacgccctacgagggccagcgc
tcctacctagtgcagtatatgcagttcagcggctccctgcacaccaagctctaccaggag
gtggaaatcgccagtgtggatgcgttccaggggcgtgagaaggacttcatcatcctctcg
tgtgtgcgggcgaatgagcaccaaggcattggatttttaaacgaccccaggcggcttaat
gtggccctgaccagagcgcgatacggggtcattattgtgggcaacccaaaggccctgtcc
aagcagcctctctggaaccacttgctgaactactacaaggagcagaaggtgctggtggag
gggcccctgaataacctgcgggagagcctcatgcagttcagcaagcccaggaagctggtc
aacaccatcaacccaggagcccgattcatgacaacagccatgtatgatgcccgggaggcg
attatcccaggatcagtctatgaccggagcagccagggccggccctcaaacatgtacttc
cagacccatgaccagattggcatgatcagtgctggccccagccacgtggccgccatgaac
attcccatcccctttaatctagtcatgccacccatgccaccgccggggtattttggacaa
gctaatgggccagctgcaggccggggcaccccgaaaggcaagactggtcgtggggggcgc
cagaagaaccgctttgggcttcctgggcccagtcagacgaatctccctaacagccaggct
agccaagacgtggcgtcacagcccttctcacagggtgccctgacccagggctacatctcc
atgagccagccctcccagatgagccagcccggcctctcccagcctgagctgtcccaggac
agttaccttggagatgagtttaagtcacagattgatgtggcgctgtcacaagactccaca
taccagggagagcgggcgtaccagcacggcggagtgacggggctgtcccagtactag
DBGET
integrated database retrieval system
