Celeribacter baekdonensis: DA792_16130
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Entry
DA792_16130 CDS
T09997
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cbak
Celeribacter baekdonensis
Pathway
cbak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cbak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DA792_16130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbak03400
]
DA792_16130
Enzymes [BR:
cbak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DA792_16130
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DA792_16130
DNA repair and recombination proteins [BR:
cbak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DA792_16130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7100
Motif
Other DBs
NCBI-ProteinID:
AVW92429
UniProt:
A0A2R4M5P4
LinkDB
All DBs
Position
complement(2537338..2538189)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVETVRRGLEPSMVGAVIARADVNRPDLRWPFPENMAKRLTGARVERLRRRSKYI
LADLDTAETLLIHLGMSGRMTVSGDPLGQFAHEHPQLEKHDHVVFHMENGARVTFNDPRR
FGAMDLMETSAETAHSLLVKLGPEPLGNHFDEAHLIAAFSGKNTPVKTALLDQHIVAGLG
NIYVCEVLFRAGIHPTRKAGQIAKARVASLVPIIREVLLEAIEAGGSSLKDFRQADGELG
YFQHNFRVYGREGASCVTPECTSEVKRIVQSGRSTFFCPVCQR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaggtcgagacggttcgtcgcgggctggaaccctctatggtgggg
gcagtgatcgcgcgggccgacgtcaatcgacctgatttgcgctggccctttcccgaaaac
atggcgaagcgattgacgggggcgcgcgtcgagcggctcaggcgacggtcaaaatacatc
ttagccgatcttgataccgctgagacgcttttgatccatttgggaatgtcggggcggatg
actgtgtcgggcgacccattgggccagttcgcccatgagcatccgcagttggaaaagcac
gatcatgtggtttttcacatggaaaatggcgcgcgcgtgacctttaacgacccgcgtcgg
tttggagcgatggatttgatggagacgagcgccgagacggcgcattcgcttttggtcaaa
ctcggtcccgaacctttgggcaatcactttgatgaggcgcatctgatcgcggcgttctcg
ggcaaaaatacccccgtcaaaaccgcgctcttggatcaacatatcgttgccgggctgggc
aatatctatgtgtgtgaagtgttgtttcgagcgggcattcatccgacgcgcaaagcgggt
caaatcgccaaagctcgcgttgcctcgcttgtgcccatcattcgcgaggtgttgttggag
gcgatcgaggcgggcgggtcgtcgttgaaagatttccgtcaggcggatggtgaacttggc
tatttccaacacaattttcgcgtctatggccgggaaggtgcgtcttgtgtcacacccgag
tgcacatctgaggtcaaaaggatcgttcagtctgggcgctcgaccttcttttgcccagtc
tgtcagagatga
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