Cellulophaga baltica NN016038: M667_04305
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Entry
M667_04305 CDS
T03562
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cbal
Cellulophaga baltica NN016038
Pathway
cbal03410
Base excision repair
cbal03430
Mismatch repair
cbal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M667_04305
03430 Mismatch repair
M667_04305
03440 Homologous recombination
M667_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbal03400
]
M667_04305
DNA repair and recombination proteins [BR:
cbal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
M667_04305
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
M667_04305
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
M667_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIY12489
LinkDB
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Position
complement(1018316..1020004)
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AA seq
562 aa
AA seq
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MRWTIKAKPEEEKIKELASALNVEDLVAQLLLQRGISTFEEAKLFFRPQLSDLHDPFLMK
DMDIAVARIETAINEGENILVFGDYDVDGTTAVALMSSYLLSFYPNVATYIPDRYAEGYG
VSYKGIDFAEDNNFSLIIALDCGVKAVDKVAYAKEKGVDFIICDHHRPGDTLPDAVAILD
PKRSDCTYPYDELCGCGVGFKLIQALGSRQGETIQDLIPYLDLVATAIGADILPITGENR
VLAYYGLKVINSDPRAGFKAIINQIKKSVLTITDVVFVIAPRINAAGRMKHGQHAVNLLT
ETNQAQAEKFADEIEKYNIDRRGLDQEITKEALTQIIENKEEEGFTSVVYKDTWHKGVIG
IVASRLTETYYRPTLVFTKSGDKLAASARSVKGFDVYNALEGCADYIEQFGGHKYAAGLT
LLEDQYNNFKHQFEKVVSETIDPNLLIPEIAVDMQIEIKDITPKLMRIIKQFEPFGPENM
TPVFMAENIQDSGYAKGVGEEGKHLKFAVTQNGYGPIGGIGFNLGDKLPMLTGRKPFSAV
FSIDENEWQGNVSLQLKLRDIK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggacgattaaagccaaacccgaagaagaaaaaataaaggaacttgccagtgct
ttaaacgtagaagatctcgtagcgcaattgttattgcaacgcggcatttctacttttgaa
gaagcaaaattgtttttcagacctcagttatcagacctacatgatccttttttgatgaag
gatatggatattgcggtagcgcgtatagaaacggcaattaatgaaggagagaatattctg
gtttttggcgattatgatgtagatggtactacagcggtagccttaatgtcttcgtattta
ttatctttttatcctaatgtggctacctatattccagatagatatgcagaaggttacggc
gtatcttataaaggaattgattttgcagaggataataacttctctttaataattgcctta
gattgcggggtaaaagcggtagataaagtggcttatgccaaagaaaagggcgtagatttt
attatttgcgaccaccatagacctggtgataccttgccagatgctgttgctattttggat
cctaagagaagtgattgtacgtatccgtatgatgaactctgcgggtgtggggtaggtttt
aaattgatacaagcattgggttctaggcaaggagaaaccattcaagatttaattccttat
ttagatttagtagctaccgctattggtgcagatattttgcctattacgggtgaaaataga
gtgcttgcctattatggcttaaaagtaataaactcagacccaagagctggtttcaaggca
ataatcaatcagattaaaaaatccgtattaaccattaccgatgttgtttttgtcattgcc
ccacggattaatgcagcggggagaatgaagcatgggcaacatgctgttaatttattgacg
gaaaccaatcaggcacaagctgaaaagtttgcagatgagattgaaaaatataatatagac
cggagaggtttagatcaagaaataaccaaagaggcacttactcagattattgaaaataaa
gaggaagaaggttttacgtctgtggtgtataaagatacttggcacaaaggagttattggt
attgtagcctctaggcttaccgaaacatattaccgcccaaccttagtatttactaaaagt
ggagataaattggcggcttccgcacgttctgtaaaaggctttgacgtgtataatgcactc
gaaggttgtgctgactatatagaacagttcgggggacacaaatatgcagcgggacttact
ttactagaggaccagtacaataattttaaacatcagtttgaaaaagtagtttcagaaacc
atagatcctaatttgttgattcctgagattgcagtagatatgcaaattgaaattaaagac
attacacctaagttaatgcggattataaaacagtttgaaccttttggaccggagaatatg
acgcctgtgtttatggcagaaaatattcaagattctgggtatgcaaagggcgtaggtgaa
gaagggaaacatttaaaatttgcggttacccaaaatggctatggccctattgggggaata
ggttttaatttaggcgataaattacccatgttaacaggtagaaaaccttttagcgctgtt
ttttctattgatgagaatgaatggcaaggtaacgtgagtttgcaattgaaattgagggat
ataaagtag
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