Cellulophaga baltica NN016038: M667_10585
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Entry
M667_10585 CDS
T03562
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbal
Cellulophaga baltica NN016038
Pathway
cbal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M667_10585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbal03019
]
M667_10585
03400 DNA repair and recombination proteins [BR:
cbal03400
]
M667_10585
Enzymes [BR:
cbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M667_10585
Messenger RNA biogenesis [BR:
cbal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M667_10585
DNA repair and recombination proteins [BR:
cbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M667_10585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Peptidase_C36
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AIY13620
LinkDB
All DBs
Position
2470025..2472226
Genome browser
AA seq
733 aa
AA seq
DB search
MSLSEIDLHSSLKKYFGFSQFKGLQESVITSILEGKNCFVVMPTGGGKSLCYQLPALMQE
GTAIVVSPLIALMKNQVDAIRGVSSEHGIAHVLNSSLTKTEIKQVKSDITSGVTKLLYVA
PESLTKDEYVEFLQSVKISFVAVDEAHCISEWGHDFRPEYRNLKSIISRLDDTIPIIGLT
ATATPKVQEDIIKNLGITDADLFKASFNRPNLFYEVRPKTQNIEADIIRFVKQNSGKSGV
IYCLSRKKVEELAQVLQVNGVSAVPYHAGFDTKTRSKYQDMFLMEDVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFISGKPVAEQ
EIGNALLQEMVAYAETSMSRRKFILHYFGEEFDDVNGDGALMDDNTKNPKDKEEAKDDLV
KVIQVVQGTMEKFKSKEIVKVLTGKVNAIIASHKTDEKPFFGIGKDRDKEHWMALVRQGL
VAGYLRKEIEQYGILHVTPKGVEYVKNPVSFMMTKDHVYNKAADDAIVSAAKTSGGVTDE
ALLKVLKDLRKKQGQKLGVPPFVIFQDPSLQDMALKYPVTLEELVNIHGVGEGKAKKYGK
PFVEFIKKYVEDNDVIRPDDLIVKSTGANSALKLYIIQNVDRKLPLDDIASAKGLSLPEL
IKEMEQIVYSGTKLNISYWIDDVLDEDQQEEIHDYYLEAESDNIDLALKEFDGDYEDEEL
RLYRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgagtgaaattgatttgcattcctcacttaaaaaatactttggattttcacaa
tttaaaggacttcaggaaagtgttattacaagtattcttgaaggtaaaaattgttttgta
gtaatgccgacaggcggtggaaaatcgctttgttatcaactccctgctttgatgcaagaa
ggtactgcaattgtagtttctccacttattgcgttaatgaaaaatcaagtagatgccatt
cgtggtgtctcctcagagcacggtattgctcatgttttgaactcatcattgacgaaaaca
gagataaaacaagtaaaaagtgatatcaccagtggtgttaccaaactactttatgtggca
ccggaatcattaacgaaagatgaatatgttgagtttttacaatctgtaaaaatatcattc
gttgcggtagatgaagcacactgtatttcagaatggggtcatgattttagacctgaatat
cgaaatttaaaaagtataattagtcgtttagatgataccattccgattattggattaacc
gctacagcaactccaaaagtacaggaagatattataaaaaacttagggattacagatgca
gatttgtttaaagcatccttcaatagacctaatttgttttatgaggtacgtcctaaaact
cagaatattgaagccgatattattcgctttgtaaaacaaaattcagggaaatctggagta
atttactgtttgagtagaaaaaaggtagaagaattagcgcaagtactccaagtaaatggc
gtgagtgctgtgccataccatgcaggttttgatactaagacacgatctaaatatcaagat
atgttcttgatggaggatgtagatgtggtggtagcaaccattgcctttggtatggggata
gataagccagatgttaggtttgtgattcaccatgatattcctaaaagtatagaaagttat
taccaagaaacaggtagagcaggtagagatgggggcgaagggcattgtttggctttttac
tcgtataaggatatagaaaaattagaaaaatttatctctggtaagcctgtggcagaacag
gaaattggaaatgccttgctgcaagaaatggtagcatatgcagaaacatctatgtcacga
agaaaattcatccttcattattttggtgaggagtttgatgatgtaaatggcgatggagcc
cttatggatgataataccaaaaatccaaaggacaaagaagaagcaaaagatgatttggta
aaagtgattcaggtggtacaaggtaccatggagaagtttaaatctaaagaaatagtcaaa
gtacttactgggaaagtcaatgctattattgcatcgcataaaaccgatgaaaagccattt
tttggtatcggaaaagatagggataaagaacattggatggcattagtgcgccaaggttta
gttgccggttacctacgaaaggagatagaacaatatggaattttgcatgtaactccgaaa
ggagtggaatatgtgaagaacccagtttcttttatgatgaccaaagatcatgtgtacaat
aaagcggcagatgatgctattgtaagtgcagctaaaactagtggcggtgttacagatgaa
gccttattaaaagttttaaaagatcttagaaaaaaacaaggtcagaaattaggcgtacct
ccctttgtaatctttcaagatccttctctacaagatatggccctaaagtatcctgtgact
ttagaagagcttgtaaatattcatggggtaggagaaggtaaagctaaaaaatatggtaag
ccattcgtagaatttattaaaaagtacgtcgaggataatgatgttattcgtccagatgat
ttaatcgtaaaaagtaccggtgctaattcagccttaaaattatacatcatccagaatgta
gatcgtaaattacctttagatgatattgcatcagcaaagggcttaagtctgccagagctt
ataaaagaaatggagcagattgtatatagtggtacgaagctaaatatttcctattggatt
gatgatgtcttagatgaagaccaacaagaagaaattcatgactattatttggaagcagaa
tcagataatatagatctagctttaaaagagtttgatggcgactatgaagacgaagaactt
cgattgtatcgtattaaatttattagcgaagtagctaattaa
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