Cellulophaga baltica NN016038: M667_13530
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Entry
M667_13530 CDS
T03562
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbal
Cellulophaga baltica NN016038
Pathway
cbal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M667_13530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbal03019
]
M667_13530
03400 DNA repair and recombination proteins [BR:
cbal03400
]
M667_13530
Enzymes [BR:
cbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M667_13530
Messenger RNA biogenesis [BR:
cbal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
M667_13530
DNA repair and recombination proteins [BR:
cbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M667_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
AIY14128
LinkDB
All DBs
Position
complement(3123945..3125846)
Genome browser
AA seq
633 aa
AA seq
DB search
MQLEPKDILKKYWGFSDFKESQEEIIAAILQQKDVLALLPTGGGKSLCFQVPALATDGIC
IVVSPLIALIKDQVDNLKKKGIKALALTGGISQNEVVDLLDNCLYGNYKFLYLSPERLQQ
DLIKDRIQGMNVNLIAIDEAHCISQWGNDFRPSYLNCSVLRDLAPDAPIIALTATATPVV
TKDIVTNLRLDEPLIKKTSFARDNIAFNVRWDDDKHYQLKQLLQDSKHSGIVYVRTRKLT
QELTHYLSSQNISATFYHGGLSKEVKGDRLKLWLDDKVRVMVATNAFGMGIDKADVSTIV
HYQIPDSVENYFQEAGRAGRNGAPATATVLTNKSDEIQVKRQFLSGLPTVAYLKTLYNKL
NNYFQISFGESSTETYQLNFNAFCATYSLNPFLTYNALRILDQNSVIALSESFSKKTSIR
FIATKNHIFDYIDTYGKIAPILQVILRTYGGIFEYDTKINTFAIAKKSSVSEKEVVKVLE
QLKKDEIITYTAQHNDIEVLFLVPREDERTINLFAKKVELLTAQKTKNIEAILQYLKNDT
VCRSQQLLAYFGEKKEACGRCDVCLKTPPIAVEIIALAKEAILMQLQQKPQTSREIIKTV
LYKEEAIFSAIKALLEDEIIDITEKNEYKIAKA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgcagctagagcctaaagacattttaaaaaaatattggggattttctgattttaaagaa
tctcaagaagaaattatagctgctattttacagcagaaagatgtcctcgctttgttacct
acaggcggaggaaaatcgctctgctttcaagttcctgcgctggctactgatggaatttgc
attgtcgtttcccctttaatcgccttaattaaagaccaagtagacaacctaaaaaagaaa
ggtataaaggcattagcgctaacgggtggtatctctcaaaatgaagtagtagatttatta
gacaattgcctttatggaaattataaatttctatacctatctcccgaaaggttgcaacaa
gatcttataaaagaccgcattcagggaatgaatgtgaatctaattgctatagatgaagcc
cactgtatttctcaatggggaaatgattttagaccttcttatcttaattgtagtgtatta
agagatctagcgcctgatgctcctatcattgctttaacagccactgcaacccccgtagtc
actaaagatattgtcactaatttaaggcttgatgaacccttaattaagaaaacttccttt
gctagagataatattgcttttaatgtacgttgggatgatgacaagcactaccaactaaag
caacttttacaagatagtaaacacagtggtattgtttatgtacgaaccagaaaactaacg
caagaattaacgcattacctaagttctcaaaacataagtgctaccttttatcatggcgga
ctctctaaagaggtaaaaggagaccgtttaaagttatggctagacgataaagtgcgggtc
atggtagctaccaacgcctttggcatgggaatagacaaagcagatgtgagtactattgta
cattatcaaatacctgatagtgtagaaaactattttcaagaagcaggtagagctggtaga
aatggtgctccagctacagctactgtactcaccaacaaatctgatgaaatacaggtaaaa
cgacaatttttgagtggtttacccacggtagcgtatttaaaaacgctctacaacaagctc
aataattactttcaaatttcttttggagaaagtagtacagaaacgtatcaattaaatttt
aatgccttctgcgccacttattctttaaacccttttctaacgtataacgcactgcgtatt
ttagatcagaattctgtgattgctttatcagaatcattctcaaaaaaaaccagtatacgg
tttatcgctacaaaaaatcatatttttgattacattgatacctatggcaaaatagcgccg
atactacaggttattttaagaacctatggcggaatttttgagtacgacactaaaataaat
acttttgccattgccaaaaaatcgagcgttagcgaaaaagaggttgttaaggtattagaa
cagttaaagaaagatgaaattattacctataccgctcagcacaatgatatagaagtgtta
tttcttgttcctagagaagatgaaagaaccattaatctctttgctaaaaaagtagaactc
cttaccgcccagaaaacaaaaaatatagaagctattcttcaatacttaaagaatgatacg
gtgtgtagaagtcagcaattactggcctactttggagagaagaaagaggcttgtggacgt
tgcgatgtgtgcttaaaaactccgcctattgctgtagaaattatagctttagccaaagag
gccattttaatgcaattacagcagaagccacaaacttctagagaaattataaagaccgtc
ctctataaagaagaggctatttttagtgctataaaggcacttttagaagatgaaataata
gatattaccgaaaaaaacgaatacaaaatagcaaaagcatga
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