Cellulophaga baltica NN016038: M667_15395
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Entry
M667_15395 CDS
T03562
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbal
Cellulophaga baltica NN016038
Pathway
cbal03420
Nucleotide excision repair
cbal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M667_15395
03430 Mismatch repair
M667_15395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbal03400
]
M667_15395
Enzymes [BR:
cbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M667_15395
DNA repair and recombination proteins [BR:
cbal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M667_15395
MMR (mismatch excision repair)
Other MMR factors
M667_15395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIY15399
LinkDB
All DBs
Position
3553885..3556215
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AA seq
776 aa
AA seq
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MENYINQLNDAQRAPVLHKDGPLIVIAGAGSGKTRVLTYRIAYLMSLGIDSFNILALTFT
NKAAREMKARIAAIVGNSEAKNLMMGTFHSVFARLLRYDGDKLGYPSNFTIYDTQDSQRL
IASIIKEMGLDKDVYKYKQVQNRISSYKNSLITVRAYFNDAEMQEADAMAKRPRMGDIYQ
NYVDRCFKAGAMDFDDLLLRTNELLNKYPEVLAKYQDRFRYILVDEYQDTNHSQYLIIKA
LSDKFQNICVVGDDAQSIYSFRGANISNILNFQKDYDNVIMYRLEQNYRSTRNIVNAANS
IIAKNTNQLEKVVWTDNDDGPAIKVHRSPTDAEEGRFVAGSIFENRMQHQMSNGSFAVLY
RTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLSYLRLVINPKDEEALKRVINFP
ARGIGMNTLDKLTVAANHYGRSIFEVIQNLDRINLKINAGTKRKLVDFTNMIKSFQIMNE
TTDAFAISEHVAKKSGLLLEFKKDGTPEGIAKMDNIEELLNGIKDFVEGQREIADATGNI
SEFLEDVALATDLDNDTGDDDRVALMTIHLAKGLEFPHVYIVGMEEDLFPSGMSMSTRSE
LEEERRLFYVALTRAEKQAYLTYTQNRYRWGKLIDAEPSRFLEEIDEKFIENLTPIEKPA
YRYKSTIDTDIFGEVDKSKLRQIKPKSGIPPSTVKPNENQLRKLRKLKPELAQPIGNTNT
VDPNLAEGSLINHTRFGRGTVVKIDGIGNDRKAEIQFDTAGIKKLLLRFAKLEVLG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaactatataaatcaattgaatgatgctcaacgagcaccagttttacataaagac
ggaccgttaattgttattgcgggagcggggtctggaaaaacacgtgtattaacctacagg
atagcttatttaatgagtctaggaattgactcttttaatattcttgcacttacatttaca
aataaggctgcccgtgagatgaaagctaggattgccgctattgtggggaattctgaagcc
aaaaacctaatgatgggtacattccactcggtttttgctagattattacgatatgacggt
gacaaattaggataccctagtaacttcactatttatgacacacaagattctcagcgttta
atcgcttcaattatcaaagaaatgggacttgataaagatgtctataaatacaaacaagtc
caaaatagaatatcatcctataaaaatagccttattacggtaagagcatattttaatgat
gcagaaatgcaagaggccgatgccatggccaaacggccaagaatgggagatatttatcaa
aactatgtagatcgctgttttaaagcaggtgcgatggattttgatgatttattactaaga
accaatgagttattaaataaatatccagaagtccttgccaagtatcaagataggtttaga
tatatattggtagatgagtatcaagataccaaccattcgcaatatctaattattaaagcg
ttatccgataaatttcaaaatatttgtgtggtaggggatgatgcacaaagtatttactct
ttccgtggtgcaaacattagcaatattctaaactttcaaaaagattatgataatgttatc
atgtaccgactggaacagaattaccgttctacccgaaatattgtaaatgcggcgaattct
attattgcaaaaaacacaaatcaattagagaaagtggtttggacagataatgatgatggt
ccagctataaaagtacacagaagtcctacggatgcagaagaaggcaggtttgttgcaggt
tctatatttgaaaaccgtatgcaacaccaaatgtcaaatggtagttttgccgtactttat
cgtaccaactcacaatcaagagctatagaagacgctttacgtaaacgtgatattccatac
cgcatctatggtggtttatctttctaccaaagaaaagagataaaagatgtattgtcttat
ttacgtcttgtaattaatcctaaagatgaggaagctttgaagcgtgtcattaattttcct
gcaagaggaatagggatgaatactttagataaacttacggtagcagcgaaccattatggt
agatctatctttgaagttattcagaatctagatcgaataaatttaaaaattaatgccggt
accaaaagaaaactagtagatttcaccaacatgattaaaagttttcaaatcatgaatgaa
actactgatgctttcgcgatttctgaacatgttgctaaaaaatctggcttacttttagaa
tttaaaaaagatggtactccagaaggtattgccaaaatggacaatattgaggagctatta
aacggtataaaggattttgttgaaggacagcgagaaattgctgatgctacaggtaatata
agtgaattcttagaagatgttgccttagctacagatttagataatgacactggtgatgat
gacagagtagctttaatgaccattcacttagcaaaaggattagagtttccgcatgtctat
attgtaggtatggaagaagacctattcccgtcaggtatgagtatgagtacccgaagtgaa
ttagaagaagaacgtagattgttttatgtcgcattgactagagcagaaaaacaagcttat
ttaacctatacgcaaaataggtaccgttggggtaaattaatagatgctgaacctagtcgg
tttttagaagaaattgatgagaaatttattgaaaatctaacaccgattgaaaaaccagca
taccgttataaatcaacaatagatactgatatttttggtgaagttgacaaaagtaaactg
cgtcaaataaaacctaaaagtggtatcccaccaagcacggtaaaacctaatgaaaatcag
cttagaaagcttagaaaattaaaaccagaattggctcaacccattggaaatacgaatact
gtagatcccaatttagccgaaggaagtttaattaatcatacccgttttggtcggggtact
gttgtaaaaatagatggcattggtaatgaccgcaaggcagagatacagtttgatactgct
gggattaaaaaattactgttgcgctttgctaaattagaagtgttaggttaa
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