Mycovorax composti: PIECOFPK_00498
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Entry
PIECOFPK_00498 CDS
T10380
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
cbam Mycovorax composti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
WWC82789
LinkDB
All DBs
Position
complement(607145..610882)
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AA seq
1245 aa
AA seq
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MALPHILKYVYTNGTDEVIRRGKKTHALGFAELVEFDKLTGNLSFRVKDDTYSSFYKVYI
QKYSDPKLISLRCTCPYNLGDICKHEVAALFQLQELLDKGQLGEDVYYDQRHTVVKLRNL
DLRSLRLLCSNETFNEAERYLQKHKAKIVSAKDETVKAIVTLGEQEYTVVIRKNEERNFD
TSCDYEDTEYPLCLPKVIVFMQLIKQHGPNYFDTIRNRDVEKNKLLEAYGYSLADDLKGK
FEFVFKDGKPFLRVLDPSIKRITPSADGSKPKPVQPKQEAVAESEVTTKTSTITRRLGIV
FNFNKKEYPYFSVEVVSGEADESQNQFVGKVEVLDISKYIDTTTFNEKDISLLNTVRKLQ
DTEVKKYITRNTPFENLLDEQEGKEDKKLINEYLLPRIKKLLCEPGENPLVYVLPQGKKF
ITQNLQSVDAIDTPVSLEFFIDKEGDTYTCESLIRTKGIVHGLEENEAPSPLIYLYNHEI
FAMPDADAVELVQRFLPDGKIRISKAEWPQQLHEFVLPLAKEYKTDFDTSLLQVIKGVDP
EIKLFLAEKGEYLVFTPVFSYNGHETSTAGRQVMLIPDQEKILAIHRNRDKENAFVQKLQ
NLHSNFIVNEEDGTLALKGKEILKENWFFLFVDAMKEMQVPVFGHEALRNFRFNTAKPQT
KIFISSNTDWFDAKVDIMFGDQRVSIAEVKRALAAKQQYVQLGDGTLGILPEDWIKKYAL
LFRVGEGNNNKLKLSQYHRSVIDELYELRNEEELQFELEEKYNRLRDFDKIPEVEPPEQL
RAVLRPYQLAGFQWLNYLNKVNWGGILADDMGLGKTVQALSFLQYYKNQHPNMKAMVVCP
TTLIYNWENEIKKFTPELTYYIHHGAARTRNTADILQYDITITTYGTLRSDIKFFLNLQF
DYLLLDESQAIKNPASKVTRAASLLNAKHRLCMSGTPLQNNTFDIYAQMNFLNPGMLGSI
EFFRQEFAIPIDKLGEADRKEHLRKLLYPFILRRTKEQVAKDLPEKQEMILWCEMGDEQR
RIYDAYRNDYRNKILGSIDTQGIAKSQLTILQGLLKLRQICDSPAILNEDEVFENHSIKI
EELAREITEDMSDHKALVFSQFLGMLGLIRKKLDELGVKYEYFDGSTSAPERERAIQNFQ
TNDEVRVFLISLKAGGVGLNLTAADYVYIVDPWWNPAVEQQAIDRTHRIGQTKNIFAYRM
ICKDTIEDKILQLQEKKKALAKDLISDETGFVKSLTKEDVEYLFS
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcattaccgcatattttaaaatacgtttataccaacggcactgatgaagtaatcaga
cgcggaaaaaaaacgcatgccttgggttttgcagaactggtagagtttgataagctaacc
ggcaatctctcttttcgtgttaaagatgatacctacagcagcttttataaagtgtacata
cagaagtacagcgaccctaagctgatttcgcttcgttgtacgtgcccatataacctaggt
gatatctgcaaacatgaagtagccgcattgtttcagttgcaagaactattagacaaaggc
cagttgggcgaagatgtatattatgaccaacgtcatactgttgtaaaacttcgcaaccta
gatttacgttctttgcgactactgtgcagtaatgaaacttttaatgaagccgaaagatat
ctgcaaaagcataaagccaaaattgtttcggctaaggatgaaacagtaaaggctattgta
acactgggcgagcaagaatatactgtggtcatccgcaaaaatgaagaacgcaacttcgat
accagctgtgattatgaagacacagaatatccgctatgcctgcccaaggtaattgtgttc
atgcagctgattaaacaacacggtcccaattatttcgataccattcgtaaccgtgatgta
gaaaaaaacaagttgttggaagcttacggatattcgcttgccgatgacctaaaggggaag
tttgaatttgtttttaaagacggaaagccctttttacgtgtactcgatccgagtattaaa
agaatcactccttctgccgatggttccaaacccaagccggtgcagcctaagcaagaagct
gtagctgaatcggaagtaaccacgaaaacttctaccattacccgccgtctggggattgtc
tttaattttaataaaaaagaatatccttatttctcggtggaagttgtttcgggagaggcc
gatgaaagtcagaatcagtttgtcggaaaagtcgaagtactggatatctctaagtacatc
gacacgaccacgtttaatgaaaaagatatttcgcttctgaatacagtaagaaaacttcag
gatacggaagtaaaaaaatatatcacacgaaacacaccgtttgaaaatcttttagacgag
caagaaggaaaagaggataaaaagctaataaacgaatacctgttaccacgcattaaaaaa
cttttgtgcgagcctggggaaaatcccctggtgtacgtattaccacaagggaaaaaattt
ataacacaaaatctgcaaagcgtagacgctatcgacacgcccgtttctctggagtttttc
atcgacaaagagggcgatacctatacttgcgaatcgttgattcgcaccaaaggcattgta
cacgggcttgaagaaaacgaggcgccatcaccacttatctatttgtataatcacgagatc
tttgccatgcccgatgcagacgctgtggagctggtacaacgctttttaccagatggtaag
atccgcatttcaaaagcagaatggcctcagcaattgcatgagtttgtgctgcccctggca
aaagaatataagaccgattttgatacatcacttttacaggtaataaaaggtgtagatccg
gaaataaaacttttccttgccgaaaaaggagaatatcttgttttcacgcctgtgttttct
tacaatggacatgagaccagtaccgcaggaagacaagttatgctgattcctgatcaagaa
aaaatcttggcgattcatcgtaatcgtgataaggaaaatgcttttgttcaaaaactccaa
aacctgcattccaactttatcgtaaatgaggaagatggtacacttgctttgaaaggcaag
gagattttaaaagaaaactggttttttctgtttgtggacgcgatgaaagaaatgcaggtt
cctgtatttggtcatgaggcgcttcgcaacttcaggtttaatacagccaaaccgcaaacc
aaaatatttatcagcagcaataccgattggttcgatgccaaagtggatataatgtttggc
gaccaacgtgtttccattgctgaagtaaagagggctctggcagctaagcaacaatatgtg
cagctgggtgatggtacattaggtatcttgcccgaagactggattaagaaatatgcttta
ctattcagagtaggagaagggaacaataataagctgaagctttctcaatatcacagaagt
gttattgacgagctgtatgaactgcgcaatgaagaagagttgcagtttgaactagaagag
aaatacaaccgcctgagagattttgataaaataccggaagtagaacctccagaacagtta
cgggctgtattacgaccctatcagctggccggtttccagtggctgaattatcttaataag
gtaaactggggtggtattttagcagacgatatgggtctggggaaaacggtacaggcttta
tcattcttgcagtattataaaaatcagcatcccaacatgaaagccatggtggtatgtccc
actacgcttatctacaactgggaaaatgaaattaaaaaatttacgccggaacttacttat
tatattcatcacggtgctgcccgcacccgcaatacggcggatattttacaatacgatatc
accattaccacgtacggcacattgcgcagcgatattaagtttttcttaaaccttcagttt
gattatctgttgctcgatgaaagtcaggcaatcaaaaatccggctagcaaggttacacgt
gctgcatcgttgctgaacgcaaagcatcgtttgtgcatgagcggtacgccgttgcagaac
aataccttcgatatttacgcgcagatgaattttctcaaccccggtatgctgggtagcatc
gagttcttccgtcaggagtttgctattcctatcgacaagctgggtgaagccgatagaaag
gaacacctgcgaaagcttttgtatcctttcattttaagacgtacaaaagagcaggtagct
aaagacttacccgaaaagcaggaaatgattttatggtgtgaaatgggtgatgagcaacgt
cgcatttatgatgcctatagaaatgattatcgaaataagattttagggtcgatagatact
caaggtattgctaaatcgcaactaaccattctacaggggttgttaaagctgcgtcagatt
tgcgactcaccggcgatcttaaacgaagatgaagtttttgaaaatcactccatcaaaatt
gaagagcttgcccgcgagattaccgaagacatgagcgatcataaagcactcgtcttctct
caattcctgggaatgctgggcctgatccgtaaaaaactcgatgagttgggtgtgaagtac
gagtatttcgacggaagtacatctgctcccgaacgcgaaagagcgattcaaaacttccag
actaatgatgaagtacgcgtattccttatttcactgaaagccggaggggtaggtttgaac
cttactgcagcggactatgtgtatattgtggatccctggtggaatccggcagtagaacaa
caggcaatagaccgtacgcatcgtattggtcaaaccaagaatattttcgcgtataggatg
atttgtaaagacacgatagaagataaaattctacaacttcaggaaaagaaaaaggcgttg
gccaaagatctcatctctgacgaaaccggatttgtgaaatcgcttaccaaagaagatgta
gagtatttgtttagttaa
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