Mycovorax composti: PIECOFPK_00532
Help
Entry
PIECOFPK_00532 CDS
T10380
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cbam Mycovorax composti
Pathway
cbam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PIECOFPK_00532 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbam03021
]
PIECOFPK_00532 (rho)
03019 Messenger RNA biogenesis [BR:
cbam03019
]
PIECOFPK_00532 (rho)
Transcription machinery [BR:
cbam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PIECOFPK_00532 (rho)
Messenger RNA biogenesis [BR:
cbam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PIECOFPK_00532 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WWC82822
UniProt:
A0ABZ2EH95
LinkDB
All DBs
Position
complement(644087..645832)
Genome browser
AA seq
581 aa
AA seq
DB search
MYDILQLNDMLVPELLDIAKQLNIPDAKKLTKQELVYRILDSQAIAGSKEETTETKPKRK
RIVKATTSVGTEEAFVEDEGTDTQEEETKEKKAKAPAKKAKAAAKKKKTTTKKEEEETVA
ESEEKETKKKKEEKTEVEEATTEAYSEQEDENEGKDFSFDPATLSFIEKALKATEKYANP
TPVIIDEVAPQPSKAKKEKEKEKDAAFNVEFDGVILSEGVLEMMPDGYGFLRSSDYNYLS
SPDDVYVSPSQIKLFGLKTGDTVHGAVRPPREGEKYFALLKVDTINGKSPEEVRDRVPFD
YLTPLFPYEKLNLFTRPEDYSTRIMDLFTPIGKGQRGLIVAQPKTGKTMLLKAVANAIAQ
NHPECYLMVVLVDERPEEVTDMERSVKAEVIASTFDEPAEKHVKVSNMALQKAKRLVECG
HDVVILLDSITRLARAHNTVSPASGKVLSGGVEANAMQKPKQFFGAARKIENGGSLTILA
TALIDTGSKMDEVIFEEFKGTGNMELQLDRRLANKRIYPAIDLTASSTRRDDLLLDKDVL
QRMNLLRVYLADMKTEEAMTELLKRMKGTKSNEEFLASMNS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatattttacaattgaacgacatgctcgttccggaattgttggacattgccaaa
cagttaaatattcctgatgcgaaaaaactgacgaagcaagagcttgtataccgtatcctt
gacagccaggcgatagcgggttctaaggaagaaacaactgaaacaaaacctaagagaaaa
cgcatcgtaaaagctaccacttcagtaggaacggaggaagcttttgtggaagacgaagga
actgacacacaggaagaagaaaccaaagaaaagaaggccaaagcgccagctaaaaaagct
aaagctgcggctaaaaagaaaaaaactacaacgaaaaaagaagaagaagaaactgtagca
gaatccgaagaaaaagaaaccaaaaagaagaaagaggaaaaaaccgaggtagaagaagct
actaccgaagcatatagcgaacaagaagatgaaaatgaagggaaagatttctctttcgat
ccagctacgctttcttttattgaaaaagccctaaaggccacagaaaaatacgccaatccg
actcctgtaattatagacgaagtagctcctcaacccagcaaagcgaaaaaagaaaaagag
aaagaaaaagatgctgctttcaatgtagagtttgatggtgtgattttgagcgagggtgtg
ttggagatgatgccagacggatatggttttttaagatcttctgactataactatttatcc
agccctgacgatgtatatgtatctccttcacaaatcaaattatttggattaaaaacaggt
gatactgtacatggagctgttcgtcctccgcgcgaaggcgaaaaatattttgcgctctta
aaagtggataccatcaacggtaagagcccggaagaagtgcgcgaccgcgtacctttcgat
tatctgacaccactattcccttacgaaaaattaaacctctttaccagaccggaagattat
tccacacgcattatggacctctttacccccattggtaaaggacaaagaggtttgatcgta
gctcagcccaaaactggtaaaaccatgttgttgaaagcagtagcaaatgctattgcccaa
aatcaccctgagtgttacttaatggtggtactggtagatgaaagacctgaagaggtaacc
gatatggaaagaagcgtgaaagccgaagttattgcttccaccttcgacgagccggccgaa
aaacacgtaaaagtgtctaacatggccttgcagaaagctaaaagactggtagaatgtgga
cacgatgtggtgatcctgctcgactctatcactcgtttggcaagagctcataataccgta
tcgcccgcttcaggaaaagtactaagtggtggtgtggaagccaatgccatgcaaaaaccc
aaacagttctttggtgccgcccgtaaaattgaaaacggaggttctcttactattctagct
acagcccttatcgataccggaagcaaaatggatgaagtgatctttgaagaattcaaaggt
accggtaacatggaactgcagttggatagaagactggctaataaacgcatttaccctgca
attgatctcacagcgtcttctacacgccgcgacgatctgttgcttgataaggacgtgctg
caaagaatgaatctgcttcgcgtatatctggccgatatgaagacagaagaagcgatgaca
gaactcttaaaacgcatgaagggcaccaagagcaatgaagaattccttgctagcatgaac
tcataa
DBGET
integrated database retrieval system
