Mycovorax composti: PIECOFPK_01571
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Entry
PIECOFPK_01571 CDS
T10380
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cbam Mycovorax composti
Brite
KEGG Orthology (KO) [BR:
cbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbam03009
]
PIECOFPK_01571 (rimO)
Enzymes [BR:
cbam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PIECOFPK_01571 (rimO)
Ribosome biogenesis [BR:
cbam03009
]
Prokaryotic type
ribosomal protein modification factors
PIECOFPK_01571 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WWC83842
LinkDB
All DBs
Position
1859510..1860820
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AA seq
436 aa
AA seq
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MKSKTLKKDKVNIITLGCSKNMVDSEVLSGQLRANGIDVVHENTKKDHNIVVVNTCGFID
KAKEESINTILEQVELKKHGRIDKVYVTGCLSERYKESLEQEIPEVDAFFGTMELPAILK
QFEADYKSELVGERLLATPKHYAYLKISEGCNRTCSFCAIPLMRGKHVSKPIEELVLEAE
KLVRMGVKEIMLIAQELTYYGLDIYKKRMLPDLLNRLADIQGLEWIRLHYAYPTKFPLEV
LDVMRERENICNYLDIPLQHASDKMLKAMKRQITKAEMNDLIAAIREKVPGICLRTTLIT
GFPGETLDDVEELKQFLDQHRFDRVGIFTYSHEENTTAYALQDDVPQEEKERRAQEIMEH
QQEISYELNQEKVGKIFKTIIDKKEAGRYIGRTEFDSVEVDNEVIISGSQRLQIGEFYNV
RIEKAYDYDLEGVVLS
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaaaaacacttaagaaagataaagtaaacattatcacgttgggatgtagcaag
aatatggtggatagcgaagtcctaagtggacagttgcgtgccaatggtattgatgtggtg
catgaaaacaccaaaaaagaccacaatattgttgttgtcaacacctgcggttttattgac
aaagcaaaggaagaaagtattaataccattctagagcaggtggaactgaaaaagcatgga
cgtattgataaggtgtatgttacaggctgtcttagtgagcgttataaagaaagcctagag
caggagattcctgaagtggatgctttttttggtactatggagctaccggccattttgaag
cagtttgaagcggattataaatcagagttagtaggggagcgattgctggcaacgccaaag
cattatgcctatctaaaaatatccgaaggttgtaatcgaacctgttctttttgtgctatt
cctttgatgcggggtaaacatgtgagtaagcccattgaggagctggtgcttgaagccgag
aaactggtaagaatgggagtaaaagaaattatgctcatcgctcaggagctaacttattac
ggtttggatatttataaaaagcggatgctccctgatttattgaatcgacttgccgacatt
cagggtttggagtggataagattgcattacgcttatcctaccaaattcccactggaagtg
ctagatgtgatgcgggagcgggagaatatttgcaattatctagatataccattacagcat
gcatccgataagatgctgaaagctatgaaaaggcagataaccaaagctgaaatgaatgat
ctgattgctgccatacgcgaaaaagtgccaggtatctgtctgcgtactacattgattaca
ggttttccgggcgagacattagatgatgtggaagaattgaagcagtttctggatcagcat
cgatttgatcgtgtgggaatctttacctactcgcatgaggagaatactacggcctatgca
ctgcaggatgatgtaccgcaggaagagaaggagcgccgtgctcaggaaatcatggagcat
cagcaagaaatatcctatgaactcaatcaggaaaaagtaggtaagatatttaaaacaatt
atcgataaaaaggaagccggcaggtatattggtcgcaccgaatttgacagcgtagaggtg
gataatgaggtgattatttccgggtcacaaaggctgcaaataggagaattttacaatgta
cgcatcgaaaaagcatatgattacgatttggaaggagttgttctaagttaa
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