Mycovorax composti: PIECOFPK_02566
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Entry
PIECOFPK_02566 CDS
T10380
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
cbam Mycovorax composti
Pathway
cbam00061
Fatty acid biosynthesis
cbam00540
Lipopolysaccharide biosynthesis
cbam01100
Metabolic pathways
cbam01212
Fatty acid metabolism
Module
cbam_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
cbam00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PIECOFPK_02566 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PIECOFPK_02566 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cbam01005
]
PIECOFPK_02566 (lpxC)
01004 Lipid biosynthesis proteins [BR:
cbam01004
]
PIECOFPK_02566 (lpxC)
Enzymes [BR:
cbam01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
PIECOFPK_02566 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
PIECOFPK_02566 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cbam01005
]
Lipid A
PIECOFPK_02566 (lpxC)
Lipid biosynthesis proteins [BR:
cbam01004
]
Fatty acid synthase
Component type
PIECOFPK_02566 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
ApeP-like
MaoC_dehydratas
UvsW-1
VEK-30
Motif
Other DBs
NCBI-ProteinID:
WWC84824
UniProt:
A0ABZ2EMP0
LinkDB
All DBs
Position
complement(2971576..2972982)
Genome browser
AA seq
468 aa
AA seq
DB search
MDNNFNPDKQHTLKQAVSISGTGLHTGILADVTLKPANAGFGIQFQRVDLPNKPIIKADC
DLVSDTSRGTTLEANGAKVSTVEHLLAALVGMGVDNCLIEINGPEVPIMDGSSMPFIEII
EEAGVEEQNAAKIWYSIDENLYLTDEEKRVEMVIMPAREYQITTLIDFNSPVLGTQHAEL
KTMKNFKEKIASCRTFCFLHELEMLLEHNLIKGGDVNNAIVVVDKPVDDAELERLKKIFK
KDNIEVKSEGYLNNLELRFPNEPARHKLLDVVGDLALIGYPVKGRVIANRPGHSTNVAFA
KLIKKHIKANKHIKDVPSYDPTVPPVYDLQYIEKTLPHRFPFLLVDKIIDLTDDKIVGIK
NVTFNEWFFQGHFPQNPVMPGVLQIEALAQCGGILAINLAGEGQYDTYFLKIDNCKFKQM
VRPGDTMILKMELTAPIRRGICEMRGTVYVGNKVATEADLVAQIVKRS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggataataacttcaaccccgacaagcagcatactttaaaacaggcggtaagcatcagt
ggtacagggttacatacaggaattctggccgatgttacattaaagcccgccaatgccggt
ttcggtatccagtttcaacgcgttgatctgcctaataagcctattattaaagcggattgt
gatttggtaagtgatacaagtcgtggcacaacccttgaggctaatggcgctaaggtaagc
actgtggagcacctgttggccgcattggtaggaatgggcgtagataactgtctgattgaa
atcaatggtcccgaagtgcctattatggacggtagctccatgccatttattgaaattata
gaggaggcaggcgtagaggagcaaaatgcagcgaaaatctggtattcaatagatgagaat
ctatatctgaccgatgaagagaagcgtgtggagatggtgataatgcccgcacgggaatat
cagattacaacactgatagacttcaattctccggttttgggtacgcagcacgccgagctg
aagacgatgaaaaactttaaagaaaagattgcttcgtgccgtactttctgcttcctacat
gagctggaaatgttgttggagcataacctgattaaaggcggtgatgtgaacaatgctatt
gtggtagtagacaagcctgtggacgatgccgagctggagcgtctgaaaaaaatctttaaa
aaagataatatagaggtaaaaagtgaagggtatctcaataatctggagttgcgcttccct
aacgagccggcaagacataaactattggatgtggtaggtgatttggcattaatcggctat
cccgttaaaggaagagttattgccaataggccaggacatagtaccaatgtggcttttgcg
aagttgattaaaaaacatattaaagccaataagcacataaaagatgtgcctagctatgat
cctacagtacctcctgtatacgatctgcagtatatagaaaaaacattaccccaccgattc
ccgttcttgttggtggataagattatcgaccttacagatgataagattgtggggatcaaa
aacgtgaccttcaatgagtggtttttccaaggacactttccgcagaatccggtaatgccg
ggagtgctgcaaattgaagcactggcgcagtgtggaggtattttagctatcaacttggca
ggagaaggacagtatgatacctacttcctgaaaattgataactgtaagtttaaacaaatg
gtgcgccccggtgatacgatgattctgaagatggaacttactgctcctattcgaagggga
atttgtgaaatgaggggaacagtatacgtggggaacaaggttgcaacggaggctgatttg
gtagctcagattgtgaaacgttcctaa
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