Petrocella atlantisensis: PATL70BA_0084
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Entry
PATL70BA_0084 CDS
T05737
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbar
Petrocella atlantisensis
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbar03016
]
PATL70BA_0084 (truB)
Enzymes [BR:
cbar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PATL70BA_0084 (truB)
Transfer RNA biogenesis [BR:
cbar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PATL70BA_0084 (truB)
Prokaryotic type
PATL70BA_0084 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF5381
Motif
Other DBs
NCBI-ProteinID:
VDN45923
UniProt:
A0A3P7P6E4
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All DBs
Position
1:78092..79003
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AA seq
303 aa
AA seq
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MYNGIINVYKEKDFTSHDVVAVLRGILGQKKIGHTGTLDPQAVGVLPVCLGKATKVADLL
TDKDKTYKTRFKLGEETDTQDHTGEVIDRKPYAVDETMILETIQSFVGDSEQLPPMYSAI
KIGGRKLYDVARSGQTIERKKRRITIHDIYDISINLPFIEMTVHCKKGTYIRTLCRDISE
ALGTCGHMVELERTASGIFTKESALTLDDIKNLAQENRLAEAIIQVDALFKDYQRLIIGT
HYNHMLYNGNKMPFEAIMNIDTVKLMDKTYYNVYNDEGDYMGIYEWLSPKNLLMPVKFFC
IRY
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtataatggcattatcaacgtatataaagagaaagactttacttctcatgatgtagtg
gctgttttaagaggaattctaggacaaaaaaaaatagggcacaccggcaccttggatcct
caagcggttggtgttttgcctgtttgtcttggtaaagcgacaaaagttgctgatttatta
acggataaagacaaaacgtataaaacacggtttaagcttggagaagaaacagatactcaa
gatcataccggtgaagttatagatagaaaaccatacgctgtagacgaaacaatgattcta
gaaaccattcaatcatttgttggtgacagcgaacaattaccgcctatgtattcagcaatt
aagattggtggcagaaagctatatgatgtagctagatctggtcagacaatcgaacgaaaa
aaaagaaggataaccatacatgatatctatgatataagcattaacttaccctttattgag
atgacggtccattgtaaaaagggtacctatattcgtaccttatgtcgtgatattagtgaa
gctcttggtacctgtggtcacatggtcgagttagaacgaacggcatcgggcatttttact
aaagaaagtgccttaactctagatgatattaaaaaccttgctcaagaaaatagattagca
gaggcgattattcaggtggatgccttgtttaaagattatcaacgtctgataattggaaca
cattataatcacatgctttataatggcaataagatgccctttgaagccattatgaatatt
gacacagttaagctcatggacaagacttactataacgtatataatgatgaaggtgattat
atggggatctatgaatggttatctcccaaaaatctattaatgcccgtgaagtttttttgt
atacgttattaa
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