Petrocella atlantisensis: PATL70BA_0409
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Entry
PATL70BA_0409 CDS
T05737
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cbar
Petrocella atlantisensis
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbar03009
]
PATL70BA_0409 (rimO)
Enzymes [BR:
cbar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PATL70BA_0409 (rimO)
Ribosome biogenesis [BR:
cbar03009
]
Prokaryotic type
ribosomal protein modification factors
PATL70BA_0409 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
LonB_AAA-LID
Motif
Other DBs
NCBI-ProteinID:
VDN46261
UniProt:
A0A3P7PSQ6
LinkDB
All DBs
Position
1:complement(395149..396498)
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AA seq
449 aa
AA seq
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MSKGKIFFVSLGCDKNLVDTEVMLGHIVDAGYELINEESEADVIIVNTCSFIHDAKEESV
RTILEMAQYKTEGHLKGLVAVGCLTQRYREEIVQEIPELDGALGTSNYDEIVDALDHIIL
REEPYISFKDINYACEPYIKRVGDQTAHYAYLKISEGCNNHCTYCIIPSLRGKIRSRSIE
SLVEEAQYLASQGKSELIIVAQDVTKYGVDLYQEKALPRLLRELVKVEGITWIRLLYCYP
EDITDELIELMATEEKICNYIDIPIQHVSDPILNRMARHSNRASIIEVINKLRTAMPDIT
IRSTFIVGFPGETDEDYEVLQSFLQEQRLDRVGVFTYSIEEGTKAAEMPGHVAPELMAVR
RDELMARQQQISMDKNEAMVGKIISCMVEGYMPEEEVYMGRTYKDAPGVDGAIFITSPFE
LLAGEFVQVQVTDFNEYDLIGEVYDEFSQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggaaaaatcttttttgtatccctaggatgcgataaaaacctggtggataca
gaggtgatgttaggtcacattgtagatgccggttatgaactgatcaacgaagaaagcgaa
gcggatgtcatcatcgtaaatacctgtagcttcattcatgatgctaaggaagaaagcgtt
cgcaccatattagagatggcacagtacaaaacagaaggtcatctcaaaggcctagtcgcc
gttggttgtctgacacagcgttaccgtgaagagattgtacaagagattccggaactggac
ggtgcccttggtacgtccaactatgacgagattgtagacgcccttgaccacatcatttta
agagaagagccttatatcagcttcaaagacattaactatgcttgtgaaccttatattaag
cgtgttggcgatcaaacagcccactatgcctatttaaagatatccgaaggctgtaacaac
cactgtacctattgcatcatccccagcctaagaggcaagatcagaagccgaagcatcgag
agtctggtagaagaagcgcagtatctggcatcccaaggcaaatcagagctcatcatcgtc
gcccaagacgtgaccaagtacggcgtagacttgtatcaggaaaaagctttaccaagactc
ctaagagaactggttaaagttgagggcatcacctggattcgtctgctctactgttacccg
gaagacattaccgatgaacttattgagttgatggcaacagaagagaagatctgtaactat
attgacatacctattcagcatgttagtgatcctattctaaacagaatggccagacacagc
aatagagcctccatcatagaggtcataaataagttaagaacagccatgccggacatcacc
atacggtccacattcatcgtaggtttcccaggggaaacagatgaagactatgaagtctta
cagtcctttttgcaagaacagcgtcttgatcgggtaggggtttttacctattccatagaa
gaagggaccaaagcagccgagatgccggggcatgtggcgccggagcttatggccgtaaga
agagacgaactgatggccaggcagcaacagatatccatggataaaaacgaagccatggtc
ggtaaaatcatctcatgtatggtagaaggctatatgccggaggaagaagtctatatggga
agaacgtataaggatgcacccggtgtcgacggtgccatatttataacatcaccatttgaa
ttattagcaggagaatttgtacaggttcaggtaacagattttaatgaatacgatttaatc
ggggaggtttatgatgaatttagccaatag
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