Petrocella atlantisensis: PATL70BA_0706
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Entry
PATL70BA_0706 CDS
T05737
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03030
DNA replication
cbar03430
Mismatch repair
cbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PATL70BA_0706 (dnaE)
03430 Mismatch repair
PATL70BA_0706 (dnaE)
03440 Homologous recombination
PATL70BA_0706 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbar03032
]
PATL70BA_0706 (dnaE)
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_0706 (dnaE)
Enzymes [BR:
cbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PATL70BA_0706 (dnaE)
DNA replication proteins [BR:
cbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PATL70BA_0706 (dnaE)
DNA repair and recombination proteins [BR:
cbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PATL70BA_0706 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
SufE
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
VDN46573
UniProt:
A0A3P7P8P5
LinkDB
All DBs
Position
1:complement(718146..721622)
Genome browser
AA seq
1158 aa
AA seq
DB search
MTKDSTIEFAHLHVHTQYSLLDGSSKIDELIGQVKDLGMKSIAITDHGVMYGVVDFYDEA
IKQGIKPIIGCEVYVANRKRTDKETGIDNTYYHLVLLAENQEGYQNLMRLVSDGFTEGFY
YKPRIDLDLLRSYSKGIIGLSACLGGHVPNEILRGDLTQAKEVAMTYNEIFGQGNFFLEL
QDHGYEEQHLVNKALIEMSKELSIPLVATNDVHYTYKEDVEAHDILLCIQTNKKVTDEDR
MRYAGGQFFLKSPQEMSALFSHVPEALKNTVEIARRCQVDFEFGKYKLPKYELDESIDKR
VYMKDICYEGLRERYENVTEAHEERLNYELKVIEEMGFIDYFLITWDFIKFARDHHIMVG
PGRGSAAGSLVSYCLKITDIDPLKYNLLFERFLNPERISMPDIDIDFCYERRQEVIDYVV
EKYGEDKVAQIITFGTMAARAAIRDVGRALDMPYNEVDKVAKMIPQELKITIDKALKMNR
ELQSLYDEDEQVKYLIDMSKRLEGLTRHSSTHAAGVVICDRAVNEYVPLNTNDDAVTTQF
TMNTLERLGLLKMDFLGLRTLTVIQDAILNVKKSQGIQLDMNRIDDNDPKVFELIGTAKT
EGVFQLESDGMKNFMKDLKPQSLEDIIAGISLYRPGPMEFIPAYIQGSRHAKDITYDCPQ
LEPILKPTYGVIVYQEQVMQIVRDLAGYTLGRSDLVRRAMSKKKEDVMLKERANFIYGNK
EEGVLGCVNNGIDAAAANRIFDKMTDFAKYAFNKSHAAAYAIIAYQTAWLKAYYPVEFMA
ALLTSVMFGGGKVAEYIYSLKAMGIEVLPPDINEGYYNFSVSKGKIRYGLAAVKNVGRGV
IDHMVAEREAGGPFVSLTDFCTRMDAKDLNKRMMENLIYAGAFTSLGGTRKQYIHNYKFV
LEAINHEKKATINGQINLFDLTEELQENKADRFEVVGEFSKEQLLTYEKEVMGIYLSGHP
LEDYAEVLNRVLTNKSLDFQPLVDGTFKVTDGTLVKYGGIISNKVVKTTRNNQTMAFLSV
EDLFGTVEVVVFPNDYEANRHYLNEDEVVIVKGRVSTQEDQDGKIICQTIRRLEDVLREV
LYIQFDDLDHYQSVIKQITPLLKAEQGQSPVVAYLKDTKRKNDFGGKYQVTIRPSLIEKL
ETLMDKDNVKVVKSLLKF
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagattctacaatagagtttgcccacttacatgttcatacccaatacagcctc
ctagatggctcgagtaagattgatgaactcataggacaggttaaagatttaggtatgaag
agcatagctataacagaccatggtgtcatgtatggtgttgttgacttttatgatgaggct
ataaaacaaggcatcaaaccaattattggatgtgaagtctatgtggcgaatcgaaagcga
acagataaagaaacaggcattgataatacctactatcatttggtattattggctgaaaac
caagaaggttatcagaacctaatgcggttagtgtcagatggctttacagaaggtttttat
tataagccgagaattgatttggatctcctaagaagttatagtaaaggcattattggactt
agtgcctgtctaggcggtcatgtgcccaacgagattctaagaggtgacctgacacaggca
aaagaagttgctatgacttacaatgagatctttggacaaggcaacttttttcttgagtta
caagatcatgggtatgaggaacagcatcttgtcaataaagcattgattgagatgagtaaa
gaactgtctataccacttgttgcaaccaatgatgtgcactatacatataaggaagatgta
gaagcccacgatattctgttgtgtattcaaaccaataaaaaggtaacagatgaagaccgt
atgcgttatgctggtgggcaatttttcttaaaatctcctcaggaaatgtctgctcttttt
tcgcatgtacccgaggcccttaagaacacagtggagattgcaaggcgatgtcaggtcgac
tttgagtttggaaaatacaaattacccaaatatgaattggatgaaagcatagataaacgt
gtttatatgaaggatatttgttatgagggtctaagggagcggtacgaaaatgtgacagaa
gcccatgaggaaaggctgaattatgaactaaaggtcattgaagagatgggttttattgat
tattttctcattacttgggattttatcaagtttgcacgggaccatcatattatggttggc
ccgggccgtggttctgcagctggtagcttggtttcttattgtttgaaaattacagacatt
gatccattaaaatataaccttctttttgaacgttttctcaatccggaacggatcagtatg
ccggatattgatattgatttttgttatgaacgcaggcaagaagtgattgattatgttgtc
gaaaaatatggtgaagacaaggttgctcagatcattaccttcggtacaatggctgcaaga
gcggccattcgagatgtaggtcgggcgcttgatatgccttataatgaagtggataaggtt
gccaaaatgattccccaagaactgaaaatcaccattgacaaggcactgaagatgaacaga
gaacttcaaagtctttatgatgaggatgagcaagttaagtatttgattgatatgtcaaaa
cgtctagaaggtttaaccagacatagttcgacccatgcggccggtgtggtcatttgtgat
cgtgctgtcaatgaatatgtaccactaaacaccaatgatgatgcggttacgacccaattt
accatgaataccctagaacgattgggattattaaaaatggattttctaggtcttcgtaca
ttaacggttattcaagatgccatattaaacgtaaaaaaatcgcaaggtattcaattggat
atgaaccgcattgatgataatgatcctaaggtttttgagttgattgggacggcaaagacc
gaaggggtttttcaacttgaaagtgacggcatgaagaatttcatgaaggacttaaagcca
caaagtcttgaagatattattgcaggtatatctctgtatagaccgggaccaatggaattt
ataccggcttacattcaaggaagtcggcatgcaaaggatattacctatgattgtcctcag
cttgaaccgattcttaagccgacctatggtgttatcgtttatcaagaacaggtgatgcag
attgttagagatctggctggctataccctaggacgtagtgacttggtacgccgagcgatg
tctaagaaaaaagaagatgtaatgttaaaagaacgggcgaattttatatacggtaacaaa
gaagaaggcgttctaggttgtgtgaacaatggtatagatgcagctgcagctaacagaata
tttgacaaaatgacggattttgcaaaatacgcctttaacaaatcacatgcagcagcttat
gctatcatcgcctatcaaaccgcatggctcaaagcctactatcctgttgaatttatggca
gctttattaacttccgttatgtttggtgggggtaaagtggctgaatatatttatagtcta
aaagcaatgggaatagaagtgctgccaccggacatcaatgaaggctattataatttttca
gtttctaaaggtaagattcgatatggtttagcggctgttaagaatgttggaagaggcgtg
attgaccatatggttgctgagagagaagcaggtggaccttttgtatctttgacggatttt
tgtacccgtatggatgcaaaagatcttaacaaacgtatgatggaaaacctgatctatgcc
ggtgcttttacatctcttggcggtaccagaaaacaatatattcataactataagtttgta
cttgaagccatcaaccatgaaaaaaaggcgacaattaacggtcagatcaatctatttgat
cttacagaagagttgcaagaaaataaagccgatcgttttgaagtggtgggcgaattctca
aaagaacagcttttaacctatgaaaaagaagtcatgggcatttatttatcaggacaccca
cttgaagattatgcagaggtgctaaatagagtgctgaccaataagagtttggatttccaa
cctttggtggatggaacttttaaagtgaccgatggaacattggttaagtatggcggcatc
atcagtaataaagtggtaaagacaacgagaaacaatcagacaatggcatttttaagcgta
gaagacttatttggtacggttgaagtcgtcgtatttccgaatgactatgaagccaatcga
cattatttaaatgaagatgaggtggttattgtaaagggtagagtctcgactcaagaagat
caagatggtaagattatctgccaaaccattagacgccttgaagatgttttaagagaagtt
ctttatatccagtttgacgacttagaccattatcaatccgtgattaaacaaattacccca
ttactaaaagctgagcagggtcaatctccagttgttgcctatcttaaagacaccaaacga
aaaaatgattttggcggcaagtaccaagttaccataaggccgagcttgattgaaaaacta
gaaaccttgatggataaggataatgtcaaagttgtgaaaagtctattgaaattctaa
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