Petrocella atlantisensis: PATL70BA_0910
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Entry
PATL70BA_0910 CDS
T05737
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cbar
Petrocella atlantisensis
Pathway
cbar02020
Two-component system
cbar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PATL70BA_0910 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PATL70BA_0910 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbar03021
]
PATL70BA_0910 (rpoN)
Transcription machinery [BR:
cbar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PATL70BA_0910 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_23
Sigma70_r4
HTH_31
HTH_38
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
VDN46785
UniProt:
A0A3P7NV74
LinkDB
All DBs
Position
1:complement(906162..907514)
Genome browser
AA seq
450 aa
AA seq
DB search
MNMNMNMDMTQKIIMTPQLEYSLKILKLSYEELIDFLQEEMLSNPILEYNEPKEVKLKMN
NEESEGDRLSYNHDQKGDDEGYTNGIPDMNSYKTDLVSHLKLQLHILDLPEKMIEIGEFL
IESLDEKGYLKIDIKDVAKILCVDEDLVNQVCQKIQKFDPPGICARDLKECLKIQLEDQK
DIKKELIELIDHHLEAIGHNELPRISKAMGITISEVQALIKEIRKLNPKPGRGFQRDLTH
YIRPDIIISKQDENYNIDICKDKIPKIKVNPYYMDLLRDGGKELGEAYPYIQNKINSANW
LIHCIDQRMETLEKVTKIIFYHQTAFFKKGRAYLKPMNQREVADALNLHESTISRTVNGK
YLLCQWGIFELKYFFSSKGIKQEIGEDASSAMAKFAIQRIVESEDKNSPYSDSKICTLLQ
NEEICISRRTVAKYREQLNIPSGKIRKQYE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaatatgaatatggatatgacacaaaaaatcataatgacccctcaactagag
tattctttgaagatcctaaaacttagctatgaggagttgattgattttttacaagaagag
atgttatcaaacccaattctagaatataatgaaccaaaggaagttaagctaaagatgaat
aatgaagaaagtgaaggcgatcgtctaagctataaccacgatcaaaagggagatgatgaa
ggctataccaatggtataccggatatgaactcttataaaacggacctagtgagtcacctg
aaattgcaactacatatactggacttacccgaaaagatgatagaaatcggggaatttcta
attgaaagtttagatgaaaagggctatctaaagattgatattaaagatgtggcaaagata
ctttgtgtagatgaagatcttgtaaatcaggtttgccaaaagattcaaaaattcgatcca
cctggaatatgtgcaagagacttaaaggaatgtttgaaaatacaactggaagatcaaaag
gatattaagaaagaattgatagagcttatcgaccatcatcttgaggcgattggccataat
gaactaccacggatttcaaaagcgatgggtattactataagtgaagtacaggcactaatt
aaagagataaggaaactcaatcctaagccgggaaggggttttcaaagagacttgacccac
tatattcgtccggatattattatatccaaacaagatgaaaactataatattgacatatgt
aaagacaaaatacctaaaatcaaggttaatccctattatatggatttacttagagatggt
ggtaaagaattaggcgaggcttatccctatattcaaaataagattaatagtgcgaattgg
ttgatacattgtattgatcaaagaatggaaactttagaaaaagtgacgaaaatcatattc
taccatcaaacggctttttttaaaaaaggtagagcctatctcaaacccatgaaccaaaga
gaagtggctgacgctttgaaccttcatgaatcaaccatcagccgcacggtgaatggtaaa
tacttattgtgccagtggggtatttttgaactaaaatattttttttctagcaagggcatt
aaacaagaaataggtgaagatgcatcatcggctatggcaaaatttgccatacaaagaatt
gttgaaagtgaagataagaatagcccttatagtgactcgaaaatatgtacccttttacaa
aatgaagaaatatgtatatccagaaggacagtcgcaaaatacagagaacagttgaatatt
ccttctggtaaaataagaaagcagtatgaatag
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