Petrocella atlantisensis: PATL70BA_0919
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Entry
PATL70BA_0919 CDS
T05737
Symbol
groEL
Name
(GenBank) chaperonin large subunit
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PATL70BA_0919 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbar03019
]
PATL70BA_0919 (groEL)
03110 Chaperones and folding catalysts [BR:
cbar03110
]
PATL70BA_0919 (groEL)
03029 Mitochondrial biogenesis [BR:
cbar03029
]
PATL70BA_0919 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cbar04147
]
PATL70BA_0919 (groEL)
Enzymes [BR:
cbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PATL70BA_0919 (groEL)
Messenger RNA biogenesis [BR:
cbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PATL70BA_0919 (groEL)
Chaperones and folding catalysts [BR:
cbar03110
]
Heat shock proteins
HSP60 / Chaperonin
PATL70BA_0919 (groEL)
Mitochondrial biogenesis [BR:
cbar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PATL70BA_0919 (groEL)
Exosome [BR:
cbar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PATL70BA_0919 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PATL70BA_0919 (groEL)
Exosomal proteins of breast cancer cells
PATL70BA_0919 (groEL)
Exosomal proteins of colorectal cancer cells
PATL70BA_0919 (groEL)
Exosomal proteins of bladder cancer cells
PATL70BA_0919 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
HAD_2
REF
Motif
Other DBs
NCBI-ProteinID:
VDN46794
UniProt:
A0A3P7NUH0
LinkDB
All DBs
Position
1:complement(914930..916555)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFGAEARAALESGVNQLADTVKVTLGPKGRNVVLDKKFGAPLITNDGVTIAKEIE
LKDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIVEGVKNIAAGANPIILRRGMK
AATEEAVRAIVEMSQTLKGREQIAEVAAISAGDEAIGDLIAEAMERASKDGVITIEESKS
MDTELEVVEGMQFDRGYLSPYMATDMDKMEALLEQPYILITDKKISNIQEILPILEQIVQ
AGAKLLIIAEDVEGEALATLVVNKLRGTFNCVAVKAPGFGDRRKAMLQDIAILTGGTVIS
EELGLDLKEATMEMLGKAKSVKIMKENTIIVDGAGSKDDIHSRVAQIKNQIEETTSDFDR
EKLQERLAKLSGGVAVIKVGAATETEMQEKKLRMEDALAATRAAAEEGIVAGGGAAYIHI
TKRIEAIVDGLEGDEKTGAKIILKALESPLRQIVVNAGLEGSVVVNKVKESAMGIGFNAL
TETYVDMVEAGIIDPTKVTRSALQNATSVASTLLTTESVVADIEEDNPMPMGGGAPGMGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaataaaatttggcgcagaagcaagagcggcacttgaatcaggtgtgaat
caattagcagatacagtaaaagtaaccttaggccctaaagggagaaacgttgttctcgac
aaaaaattcggagcaccactgattaccaatgatggtgttaccatagcaaaagaaattgaa
ttaaaagacccctttgagaatatgggtgcacagctggttaaagaagttgcaaccaaaacc
aatgatgtggccggtgacggaacaacaacagcaaccgtcctagcacaggcgatgattgta
gaaggcgtaaaaaatattgcggctggcgcaaatccgattattcttagacgtggtatgaag
gctgcgacagaagaagcggtcagagcaatcgttgaaatgagtcaaacactaaaaggcaga
gaacaaatagcagaggttgcagcaatttctgccggcgatgaagccattggtgatttgatt
gctgaagctatggaaagagcttccaaagatggtgtcattactattgaggaatcaaagagc
atggacactgagcttgaagttgttgaagggatgcaatttgatcgaggctacttgtcacca
tacatggcaacggatatggacaagatggaagccctacttgagcaaccctatattttaata
acggataaaaagatctctaacattcaagaaatattaccaatccttgagcaaattgttcaa
gcaggtgctaaattattaattatcgctgaagatgttgaaggcgaagcattggcaaccctt
gtcgttaacaaattaagaggtacttttaactgtgtggcagttaaggcccctggttttggc
gatcgtcgtaaagccatgttacaagacattgcaatattaacaggtggaacggttatatct
gaagaactaggccttgacttaaaagaagcgacaatggagatgcttggtaaagcaaaatcc
gttaagattatgaaagaaaatacgattattgttgacggtgcaggtagtaaagatgacata
cacagccgtgtggcacaaatcaagaatcagatagaagagaccacgtcggactttgaccgt
gaaaaacttcaagaaagattggcaaaattatccggtggtgtagcggttattaaagtggga
gctgcaacggaaacagaaatgcaagaaaagaaattacgtatggaagatgccttggcagcg
acccgtgcagcagctgaagaaggtattgtagcaggcggtggcgcagcatacatccatatt
accaaaagaattgaagcaatcgtggacggattagaaggcgatgaaaaaacgggtgccaaa
atcatattgaaagctttagaatctcctctacgtcaaatagttgtgaatgcaggacttgaa
ggttccgtagttgttaataaagtaaaagaatccgctatgggtattggatttaatgcactt
acggaaacctatgtggatatggtagaagccggcattatcgatccaacaaaagtaacacgg
tcagctttgcaaaatgctacatctgttgcatcgacgttgttaacaacagaatctgtcgtc
gctgatattgaagaagacaatccaatgccaatgggcggtggcgcaccaggtatgggcatg
atgtaa
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