Petrocella atlantisensis: PATL70BA_1454
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Entry
PATL70BA_1454 CDS
T05737
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03420
Nucleotide excision repair
cbar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PATL70BA_1454 (pcrA)
03430 Mismatch repair
PATL70BA_1454 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_1454 (pcrA)
Enzymes [BR:
cbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PATL70BA_1454 (pcrA)
DNA repair and recombination proteins [BR:
cbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PATL70BA_1454 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
PATL70BA_1454 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
DUF3553
CarD_TRCF_RID
Flu_PB2_3rd
Motif
Other DBs
NCBI-ProteinID:
VDN47339
UniProt:
A0A3P7S3X0
LinkDB
All DBs
Position
1:complement(1447608..1449881)
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AA seq
757 aa
AA seq
DB search
MSIYDTLNQEQKEAVFHTEGPLLLLAGAGSGKTRVLTHRVAYIIEKNLAKPWEIMAITFT
NKAAKEMRARVDHLIGHGGQDVWVSTFHSSCVRFLRQYIDQIGFEKSFNIYDTDDSKKII
REAMKAQNIDPKQYKESGILAKISEAKNQLLSPLEYRKSVMGDMRKEVYSKIYDYYQDRL
KRNNALDFDDLLFQTVELFRLRPDILEKFQNRFKYIMVDEYQDTNGVQFKLISQLAGHYK
NLCVVGDDDQSIYKFRGADITNILDFEKVYKGAKVIKLEQNYRSSKTILDAANHVIKNNE
KRKAKRLWTDNGTGSLIQFHHVDNEKEEAKLVVNHIQNNIKNDHKGYNDHAILYRTNAQS
RVLEERLIYENIPYKIFGGTSFYQRKEIKDVLAYLRLINNSIDNLAVKRVINVPRRGIGD
TTVDKLESYANDIGISLFEAIKESDNIPGLARASLKIKGFKNLILSLKAEMETMSLMDFM
DEVLKRTNYIKELEDEGTDEAKSRIENIGELISKLADYVNKKKEEDEEPTLSGFLEEVAL
VADIDNLVESNEVVVLMTLHSAKGLEFPTVFLTGMEDGLFPSYMSISTGSEEDIEEERRL
CYVGITRAEEELVIIASKSRMTHGRTQYNALSRFVKEIPSDLLDSSQTLELARDKEDQDS
DLFSKSNISNTSVLPKQRDRSFFTNAPYQAKQPAKALPKNENITLDYVVGDLVKHMKFGI
GQVMEIGPGGADHQVTVNFPSVGTKKLLARLSGLKKM
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatatgatacgttgaaccaagaacaaaaagaggcggtttttcatactgaagga
cctttactactactggcaggtgccggatcaggaaaaacaagggtactaacacaccgtgtg
gcctatataattgagaagaacttagcaaagccttgggaaatcatggccatcacttttaca
aataaagcagcaaaagagatgcgcgcgcgggtggaccatctgattggtcatggcggtcaa
gatgtttgggtgagtacctttcattcctcctgtgtacgttttttgagacaatatattgat
cagattggatttgagaaaagcttcaatatatacgataccgatgattccaagaagattatc
cgagaagctatgaaagcacaaaacatagatccgaagcaatataaggaaagtggcatctta
gcgaagattagcgaggccaaaaaccaattattaagccccttagaataccgtaaatccgtt
atgggggatatgcgtaaagaagtctactccaagatttatgactattatcaagaccgtttg
aaaagaaataatgctctggactttgacgacttactcttccagactgtagagctttttaga
ttgcgaccagacatattagagaaattccaaaatagattcaaatacattatggtggatgaa
tatcaagataccaacggggtacagttcaagctcatatcccagctagctggccattataag
aacctatgtgtggttggtgacgatgatcagtccatctacaagttccgtggtgcagacatt
accaacatcttagattttgaaaaggtatacaaaggggccaaagtcattaagctagaacag
aactatcgttcaagtaagaccatcttagatgcagccaatcatgtgattaagaacaatgag
aaaagaaaagcaaaacgcttatggacggacaatggtacaggcagtttaattcaatttcac
catgtggacaatgaaaaagaagaagcaaaactggttgtaaatcatatccaaaacaacata
aaaaacgaccacaaaggctataatgatcatgcgattttatatagaaccaatgcacagtcg
agggtcttagaggagcgtctgatttatgagaacataccttataagatctttggaggaact
tctttctatcagagaaaagaaatcaaagacgtactggcttatcttagactgattaacaac
agcatcgataatctggccgtcaaaagggtcattaatgtgccaagaagaggtattggtgac
accacagtggataagctagagagctatgccaacgatatcggcatcagtctttttgaagcc
atcaaagaatccgacaatataccgggacttgcaagagctagtctgaagatcaaaggcttt
aagaacctcatcttgtcacttaaagcagagatggaaaccatgtcgctcatggattttatg
gacgaagtactaaaacgtaccaactatattaaggagttggaagatgaaggtacagatgaa
gccaagtctagaatcgagaacattggtgaacttatatccaagttggctgattatgtgaat
aagaagaaggaagaagacgaagaaccgactttgtccggtttcttagaagaagtggcatta
gttgccgatatcgacaatctggttgagagcaatgaagtggtggttctaatgaccttacat
agcgctaaggggctagaattcccaactgtattcttaaccggtatggaagacggacttttc
ccaagctatatgagcatttctacaggtagtgaagaagacatcgaggaagagcgtcgtctt
tgctatgtgggcataaccagagcggaagaagagttggtcatcatagcctccaaatcaaga
atgacccatggacgcacacaatataatgcactgtccagattcgtaaaagagattccaagt
gatttattggattcaagccaaactctagagctagcaagggataaagaagatcaagacagc
gaccttttttctaagagtaatatctccaatacttctgtactaccaaagcaaagagatcgt
agtttctttacaaatgccccatatcaagccaagcaaccggcaaaagcattaccaaaaaac
gaaaacattacactggattatgtcgtaggcgacttggttaagcatatgaagttcggtatt
ggtcaagtgatggagattggaccgggtggtgcagaccatcaggttacggtgaattttcca
agtgttgggacaaagaaattactggcaagattatcaggcctcaaaaaaatgtag
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