Petrocella atlantisensis: PATL70BA_1554
Help
Entry
PATL70BA_1554 CDS
T05737
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PATL70BA_1554 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbar03019
]
PATL70BA_1554 (recQ)
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_1554 (recQ)
Enzymes [BR:
cbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PATL70BA_1554 (recQ)
Messenger RNA biogenesis [BR:
cbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PATL70BA_1554 (recQ)
DNA repair and recombination proteins [BR:
cbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PATL70BA_1554 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
VDN47439
UniProt:
A0A3P7S4F0
LinkDB
All DBs
Position
1:complement(1555430..1557223)
Genome browser
AA seq
597 aa
AA seq
DB search
MNTFSETKTIELCLKKYYGYTDFKEGQRLAIESIINRKDTLILMPTGGGKSICYQIPALL
FSGVTLVISPLISLMKDQVDTLRDMGIEATYINSALDEVEMSDRYEGIQAQRYKMIYIAP
ERIESRLIRDIIRYNTIDFIAIDEAHCVSQWGHDFRPSYRNIANILNKLPYRPVIAALTA
TATELVRDDIMDQLALYEPEVFVTGFDRKNLHFSVLKGVNKKRYIGQYVKKNSESSGIIY
CGTRKETEMLYHALERMHIAVGMYHGGMSMDERRRHQERFIYDDYKVMVATNAFGMGIDK
SNVRYVIHHNMPENIESYYQEAGRAGRDGEKSACILLYGPGDQKLRRFLIEETPDISPER
KKYRFAQLQKMVNYCHINTCLRVQLLGHFGEASSEEMCDGCGNCDGKAHRVDITTESQKI
ISCILRMKERYGVSIVAEVLKGSKSKKVSGTPLESLSTYGILREYTLIQIKEMIHLLIAE
GYLHMTQDGYPVIKVTQEAESILYGNKKVYSNRIEIVAIESSDQLFDRLKALRKIIAVKT
KLPPYTIFHDKTLKAMASQKPKDKISLMAIGGVGESKFRKYGEQFLKVIEDYVDSNE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttttagtgagacaaagacaatagaattatgtctaaaaaaatattatggctat
accgattttaaggaaggccaacgactggcgatagagagcattataaatagaaaagatacg
ctcatcttgatgcctacaggtggtggaaaatctatatgttatcagattcctgccttactt
ttttcgggggttactttggtgatatcacctttgatttccttgatgaaggatcaggttgat
accttaagagatatgggcatagaagcaacctatattaacagtgcacttgacgaagtagag
atgtcagataggtatgaaggcattcaggcacagcgctataaaatgatctatattgcccca
gaacgcatagaaagtcgtttaattagagatattatccgttataatacaattgattttatt
gccattgatgaggcccattgtgtttcccagtggggacatgattttaggccaagttataga
aatattgccaacatattgaacaaattgccatatagaccggttattgcggctttaacagca
acggctacagagttggtacgcgatgatattatggaccagttggctttgtatgagcctgag
gtttttgttaccggttttgaccgtaagaacctacacttttcagtcctaaaaggcgtcaat
aaaaaacgttatatcggacaatatgttaagaagaatagtgaaagctcaggtataatctat
tgtggtacgaggaaagaaacagagatgctataccatgcacttgaacgtatgcatatagct
gtaggcatgtatcatggtggcatgagtatggatgaacggcggcgccatcaagagcgcttt
atctatgatgactacaaagtcatggtggccacaaatgccttcggtatgggcattgataaa
tccaatgtaagatatgtaatacatcataatatgccggagaatattgaatcttattatcaa
gaggccggccgagccggacgagatggagaaaaatccgcatgcatattattgtatgggccg
ggagatcagaagcttagaaggtttttaatagaagaaacaccggatatatcacctgaaaga
aaaaaatacagatttgcacagcttcagaagatggtgaattattgtcatattaatacctgc
ttaagggtacagttacttggccattttggtgaggcgtccagtgaggaaatgtgtgatggt
tgtggcaattgtgatggaaaagctcaccgagtcgacatcaccacagaatcccaaaaaatc
atatcttgcatattgagaatgaaagaaagatatggggtgtctattgtagcagaagtgctt
aaaggctcaaagtctaaaaaagtatcaggtacgccacttgaatcgctctcaacctatggt
attcttagagaatatactttaatacaaatcaaagaaatgattcatctattaatcgcagag
ggatacttacatatgactcaggacggttatccggttattaaagtgactcaagaggcagaa
tctattctgtatggtaacaaaaaggtgtactctaaccgtattgagatcgtagctattgag
tcatcagatcagttgtttgatcggttaaaagcccttagaaaaatcatagcagtcaaaaca
aaattacccccctatacgatctttcacgataagacattaaaagcaatggccagtcaaaaa
ccaaaagacaagatcagcttaatggcgataggtggtgtgggagaaagcaagtttagaaaa
tacggtgagcaattcttgaaagttatagaggattacgttgacagtaacgaatga
DBGET
integrated database retrieval system
