Petrocella atlantisensis: PATL70BA_1636
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Entry
PATL70BA_1636 CDS
T05737
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PATL70BA_1636
09124 Replication and repair
03420 Nucleotide excision repair
PATL70BA_1636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbar03021
]
PATL70BA_1636
03036 Chromosome and associated proteins [BR:
cbar03036
]
PATL70BA_1636
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_1636
Enzymes [BR:
cbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PATL70BA_1636
Transcription machinery [BR:
cbar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PATL70BA_1636
Chromosome and associated proteins [BR:
cbar03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PATL70BA_1636
DNA repair and recombination proteins [BR:
cbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PATL70BA_1636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PDDEXK_1
PhoH
Motif
Other DBs
NCBI-ProteinID:
VDN47523
UniProt:
A0A3P7PBI2
LinkDB
All DBs
Position
1:complement(1633978..1636341)
Genome browser
AA seq
787 aa
AA seq
DB search
MARYEIQVSVRNIIDYILRGGSIESVALSSTRAVDGTRAHQRFQKAQMDDYLVEVKLVHT
CQMDQIDFTITGRMDGLFEEDGIIVIDEIKSTGMPLHLIKGNNIMHWAQVKMYGYIYAHQ
NQLMGLTCRLTYIELEDYNVRHFTSYETIEDLEVFYYDILGRYAKWALSLERFKERCLES
VGRMTYPFPSYRKGQKQLMHGVFKTIIEGQKLFSRAPTGIGKTIATLFPAIKALGEKKTK
KIFYLTAKTIGKEVANQTLNLLEDQGMVLKRVTITAKEKICLNEVTKCNKEDCPYALGHY
DRVNVAIEAAFKATDCYTRDVIESFARLHQVCPYELSLDLALFCEVIVCDYNYVFDPSAK
LQRFFVEGSGGYTLLIDEAHNLVDRGRSMYSAVLEKDQVLELRRKVKDLDAKLYKYMTRL
NQKMLHYRKACEDYEHLRFETKDMPYDIEDDLRAIIYRTEKIFKEHQNWQHMDMLLDFFF
MAYDYVKKTELYSEKYITTYEKKGNNLRIHLYCMDPSDNIRMATLDMNGVVFFSATLLPM
SYYMDLLGGNKENYGMMLSSPFDSEKLGLVIDRSISTKYHNRDSSIGPIGEHIMTIAKEK
KGNYLVFFPSYKYMEDVLNDLVFSKKVEEEFDLLYQERGLTEVAKEAFIQSFEKPRDRSL
IAFSVLGGMFSEGIDLVGNRLIGVLIVGVGLPMICYENDLIKAHFGRKGFDYAYVYPGMN
KVLQAAGRVIRSIHDKGVVVLLDERFASHQYKTLFPLEWSHYKIVNKKEDLYTVLETFWN
EENMNKS
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtacgagattcaggtttcagtaagaaatataattgattatatcctaagaggg
gggagtattgaatccgttgcactctcaagcaccagagcggtagatggtaccagagcccat
caaaggttccagaaggctcaaatggatgactaccttgttgaagttaagctggttcataca
tgccaaatggatcaaatcgatttcaccattaccggtcgtatggacggtctttttgaagag
gacggtataattgttattgatgaaatcaaatccactggtatgccccttcacctaatcaaa
ggtaacaatattatgcactgggcacaggtcaaaatgtatggttatatctatgcccatcaa
aatcagcttatgggccttacatgtagactgacttacattgagttggaagactataatgtg
cggcattttacctcctatgagaccatagaagaccttgaagtcttctattatgacatactg
ggccgttatgccaaatgggcacttagcttggagagattcaaggaaagatgcttagaaagt
gtcggacgtatgacgtatcctttccctagctaccgtaaaggtcaaaagcagcttatgcat
ggcgtctttaagaccattatagaaggtcagaagcttttttcaagagcaccaacagggatt
ggcaaaaccatcgcaacgttatttcctgctatcaaagctttaggtgagaaaaagaccaaa
aagatattttatctaacggcaaaaaccattggtaaggaagtggccaatcaaacactgaac
ttactggaagaccaaggtatggtattaaaaagggtcacaataacagccaaagagaaaata
tgccttaatgaggtgactaagtgtaataaagaggattgtccctatgccttaggccattat
gaccgggtgaacgtggctattgaggcggcgtttaaggcgacggattgttatacacgggat
gtaatcgaaagctttgctaggctgcatcaggtttgcccctatgaattatctttggatttg
gcattgttttgtgaagtgattgtttgcgattataattatgtctttgaccccagcgctaag
ctacaaaggttttttgtcgaaggttccggtggctacaccttattgattgacgaagcccat
aatcttgttgaccgaggaaggtccatgtactctgctgttcttgaaaaagatcaggtttta
gaattacgacgtaaggttaaggatttagatgctaagctttacaagtacatgacgcggtta
aaccagaagatgttgcactatagaaaagcttgtgaagactatgaacatttaagatttgag
acaaaagatatgccctatgatatagaagatgatcttagagccattatctatagaacagag
aaaatcttcaaagaacatcaaaattggcagcatatggatatgcttttggattttttcttt
atggcctatgattatgtcaagaaaacagaattatacagtgaaaagtatattaccacttat
gagaagaaaggtaataatctaagaatacacttgtattgtatggatccaagtgacaatata
aggatggcaacccttgatatgaatggtgtcgttttcttttctgcaacccttttgcccatg
tcctactatatggatttgttaggtggtaataaagagaattatggcatgatgttatcatcg
ccttttgatagtgaaaaattgggtctggtaattgaccgctctatttccaccaagtatcat
aaccgtgatagctctattgggcctattggggaacatattatgaccattgctaaagagaaa
aaaggaaactatttggttttttttccatcctataaatatatggaggatgtattaaatgat
ttagtcttttcaaagaaagttgaagaagaatttgacctactctaccaggaaagaggcctg
acagaagtagcaaaagaagccttcattcagtcttttgaaaagcccagagatcgctcttta
atcgctttttctgttttgggtggtatgttctctgaaggcattgatttggtggggaaccga
ctgattggtgttttgatagtgggtgtaggtttgccgatgatctgttatgaaaatgatttg
attaaggcacattttggtcgaaaagggtttgattacgcttatgtatatccgggtatgaat
aaggtacttcaggcagccggaagggttataagatcgattcatgataagggcgtggtggtt
ttgttggatgaacgatttgccagtcatcaatataagacattatttcctcttgaatggtcc
cattataaaattgtcaataaaaaagaggatctgtataccgtgttagaaacattttggaat
gaagagaatatgaacaaatcgtaa
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