Petrocella atlantisensis: PATL70BA_2789
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Entry
PATL70BA_2789 CDS
T05737
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cbar
Petrocella atlantisensis
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbar03400
]
PATL70BA_2789 (sbcD)
DNA repair and recombination proteins [BR:
cbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PATL70BA_2789 (sbcD)
Archaeal homologous recombinant proteins
PATL70BA_2789 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
VDN48693
UniProt:
A0A3P7PF37
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All DBs
Position
1:2837545..2838711
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AA seq
388 aa
AA seq
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MKILHTGDWHIGKLVHGIHMTEDQKYLLDQLMDLIIQEKPDVMIVAGDIYDRSIPPVEAV
EVLDSFLSEAVLTHKLKIIAIAGNHDSSNRVGFASRLLMDQGLHIHGNIRKVIVPIVIED
ENGPVYFYPIPYGEPAIIREIYDDESIKDHETAMKRIISDIQANKPANGRHICIAHGFVM
GAMEAETSESERPLSIGGSEYVDVRYFEGFDYVALGHLHKPQKVKHEHIRYAGSLLKYSF
SEANQKKSMTMVDMDGSGSVTIKQISLNPLKDMRIIKGKLENLMDPKIYAGTNTKDYIMA
ILTDRGEIMDAIGKLRSIYPNILKIEREVFEREAGMMQTSAGHAFAKKSILELFGEFYEN
VSAEAFTDEKRDVIAGVMNALEQEGRAL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattacatacaggggattggcatatcggtaaattggtccatgggattcatatg
acagaagatcaaaaatatctgcttgaccaattaatggatttaataatacaagaaaaaccg
gatgtcatgattgttgccggagatatatatgaccgttcaataccacccgttgaagcggta
gaggttctagatagctttttatcagaggcagtcttaacccataagttgaaaatcattgcc
attgcaggtaaccatgacagctcgaatcgtgttgggttcgctagccgacttttaatggat
caaggacttcatattcatggaaatatcagaaaagtcattgtgccaatcgtaatagaagat
gagaatggaccggtttatttttatccgattccttatggagaaccagccataattagagaa
atctatgacgatgaaagcattaaggatcatgaaacggctatgaaaaggataatctcagat
atacaggccaataaacctgctaatggtcgacatatttgtattgctcatggttttgttatg
ggtgctatggaagcggaaacgagtgagtctgaaagaccgttatctattggtggatctgaa
tatgtggatgtacgctattttgaaggctttgattacgtggcgctgggccatttgcataag
ccgcaaaaggtcaaacatgaacatattcgttacgctgggtccctactcaaatactcattt
tccgaagccaatcagaagaaatccatgactatggtagacatggatggtagcggtagcgtt
accataaagcaaatcagtttaaaccccttaaaagacatgagaatcattaagggcaaactt
gaaaatctgatggatcctaaaatatatgcaggtacgaatacaaaggactatataatggca
atattaacagaccgaggggagattatggatgcgattggaaagctaagatccatataccca
aatatcttaaaaattgaaagagaagtttttgaaagagaagccggtatgatgcagacctca
gcagggcatgcatttgcaaagaaaagtattttggaactcttcggtgagttctatgaaaat
gtctctgcagaagccttcacagatgaaaagagagacgtaattgcaggtgtcatgaatgca
ttggaacaagaggggagggcgttataa
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