Petrocella atlantisensis: PATL70BA_3296
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Entry
PATL70BA_3296 CDS
T05737
Name
(GenBank) Type IV secretion system protein VirD4
Organism
cbar
Petrocella atlantisensis
Pathway
cbar03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cbar00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PATL70BA_3296
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
UvrD-helicase
DEAD
Zeta_toxin
AAA_19
Motif
Other DBs
NCBI-ProteinID:
VDN49222
UniProt:
A0A3P7S3N2
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All DBs
Position
1:3364670..3366472
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AA seq
600 aa
AA seq
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MTENFKKYAFRFLPYFIIAYVFNQLSELYRGIDEAKPIVRLIKVSEQAGLLFDTPWISFN
IQDVLVGIIGGATTFAVVYIKGKNAKKYRHGVEYGSARWGNANDIKPYMDTEFEKNIILT
KSERLMMNSRPKNPKHARNKNVLVVGGSGSGKTRFFVKPNLMQMHSSYVVTDPKGTVLVE
CGKLLERGRPKGIKNGAVEYEPYHIKVLNTINFRKSMHYNPFAYIRSEKDILKLVSAIIA
NTKGEGEKAGEDFWVKAERLYYTALIGYIYYKAPKNEQNFTTLLEMINASEAREDDEDFK
NPVDLLFEALEREDPGHFAVRQYQKYKLAAGKTAKSILISCGARLAPFDIKELRELMEYD
ELELDTLGDKLTALFVIISDTDDTFNFVVAMMYTQLFNLLTDKADDVYGGRLPIHVRFLL
DEFANIGQIPKFEKLIATIRSREMSASIILQTQSQLKAIYRDHADTIIGNCDTSLFLGGK
EKSTLKDLSESLGKETIDLYNNSENRGRERSYGINYQKVGKELMTMDELSVMDSGKCILQ
LRGVRPFLSDKFDITKHKYYKLLGDSDKRNNYDIDKSLSTKLRFKKNQPIELVELNIQGS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaattttaagaagtatgcattccggttcctgccttacttcatcatcgcttat
gtatttaatcagttatcagaattatacagagggattgatgaagcaaagccaatagtaagg
ttgattaaggtgtcagagcaagcaggtctgttgtttgatacgccatggattagctttaac
attcaagatgttttagttggcatcattggaggtgcaacaacctttgcggtagtttatata
aaaggtaagaatgccaagaagtaccggcatggtgttgagtatggttcggctagatggggt
aatgcaaatgacattaaaccttatatggatacagagtttgaaaagaatatcatacttact
aagtcagaacgattgatgatgaatagtagaccgaagaatcccaagcatgccagaaacaag
aatgttcttgttgtaggtggttccggttcaggtaaaacaagattctttgttaaaccgaac
ctgatgcagatgcattcaagctatgtagtcacagatcccaaagggaccgtgcttgtagaa
tgtggtaagttattggaacgaggtagacctaaaggaataaaaaatggggctgttgagtat
gagccgtatcacatcaaagttctgaacacgattaattttaggaagtccatgcattacaat
ccatttgcatatattcgttcagaaaaggatattttgaagcttgtaagtgcaattattgcc
aatacaaaaggtgaaggtgaaaaagccggtgaagatttttgggtaaaagccgaaaggctc
tattacacagctctcatcggctatatttattataaggcacctaaaaatgagcagaacttt
acaaccttacttgaaatgataaatgcaagtgaagctagagaagatgatgaagattttaag
aatccagttgatttgctttttgaggctttagagagagaagatcctggacattttgctgtt
agacagtaccaaaaatataaactggctgcaggaaaaacagctaaatcaatattgattagt
tgtggtgctagattagcaccttttgatataaaggagctacgagaactcatggagtatgat
gagttggagcttgatactttgggtgacaagttgacagcactatttgttattatttctgat
acagatgacacttttaactttgttgtagcaatgatgtatacccaactatttaaccttctg
actgataaagcagatgatgtttatggaggtcgattgccaatccatgttagatttctgctt
gatgagtttgccaatatcggtcagataccgaagtttgaaaaacttatagcaacaatcaga
tctagagagatgtctgccagtattattcttcagacgcaaagtcagttaaaagcaatctat
cgtgaccatgcagacaccataatcggtaactgcgatacatcgttgttcttaggtggtaaa
gagaaatcaaccctaaaggacttatcagaaagtttaggtaaagaaaccattgatctatac
aacaattcagagaatcgaggacgtgaaagaagctatggtattaattatcaaaaagtagga
aaagagttaatgaccatggatgagctttcagttatggattcaggaaagtgtattctccag
ttaagaggtgttagaccttttctttcagataaatttgatataacgaaacacaagtattat
aagttacttggtgatagtgataagcgaaataattacgatatcgataagagcttatcaacg
aaactacggttcaagaagaaccaaccaatagaattagtagaactaaatattcaaggtagc
taa
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