Cryptococcus bacillisporus: 91980950
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Entry
91980950 CDS
T11001
Symbol
I312_100902
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cbas Cryptococcus bacillisporus
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbas03019
]
91980950 (I312_100902)
03041 Spliceosome [BR:
cbas03041
]
91980950 (I312_100902)
03036 Chromosome and associated proteins [BR:
cbas03036
]
91980950 (I312_100902)
Enzymes [BR:
cbas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
91980950 (I312_100902)
Messenger RNA biogenesis [BR:
cbas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
91980950 (I312_100902)
mRNA cycle factors
Common to processing body (P body) and stress granule
91980950 (I312_100902)
Spliceosome [BR:
cbas03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
91980950 (I312_100902)
Chromosome and associated proteins [BR:
cbas03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
91980950 (I312_100902)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
91980950
NCBI-ProteinID:
XP_066604867
LinkDB
All DBs
Position
2:complement(join(135903..137414,137471..137832,137882..137921))
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AA seq
637 aa
AA seq
DB search
MAATDVNGLASQMNSVNLNGAAQKPQKPAYVPPHLRNRAAPPAAPPPAAPAAYRPSPTGL
PTPATTPPTRHSVPAPLSEDDVGGWGAQPRVRKTFEHGAPPGFGSWKNGQHVVGARNTRM
EKEMYGEVGDGLHQSTGINFDKYADIPVEVSGKGVPEPVTEFTNPPINPVLLENVKYARY
TTPTPVQKYSIPIVADGRDLMACAQTGSGKTGGFLFPILSALFTYGPSAPPVEQDTGYGY
RRTKKVYPTALVLAPTRELVSQIHEEARKFAYRSWVRPAVVYGGADIGSQMRALDRGCDL
LSATPGRLVDLIERGKISLANVKYLVLDEADRMLDMGFEPQIRRIVDEEDMPGVLDRQTL
MFSATFPREIQNLARCFLKEYIFLTVGRVGSTSENITQRVEYVDDQDKRSLLLDLLLAEQ
SGGLILVFVETKRMADTLCDFLCSRRHNATSIHGDRTQREREAALYAFKSGRAPILVATA
VAARGLDIPNVTHVILYDLPNDVAEYTHRIGRTGRAGNVGTSTAFFNRGNSNIGKDLIEL
LKEANQEVPQWLVEISSERSYGGGGGGYRGGRGRSTGGGGGRMGGRDMRQGGGGGYGGGG
YGGGARTGGGYGGGGGASWGNGGGFPPAGGDSGASWW
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaccgatgtcaatggactcgcgtcccaaatgaactccgttaaccttaacggt
gccgctcagaagcctcagaaacctgcctacgtccctcctcacttgaggaaccgtgccgct
cctcccgccgctccccctcctgcggcccccgcagcctacaggccctctcccaccggtctc
cccacccctgccaccacccctcccaccaggcatagcgttcctgcccccctttccgaggac
gatgtcggtggatggggtgctcaacctcgcgttaggaaaactttcgagcatggtgctcct
cccggatttggcagctggaagaatggccagcacgttgttggtgctaggaacacgaggatg
gaaaaggagatgtatggtgaagtgggagacggattgcaccagtccaccggtatcaacttt
gacaagtacgccgatattcccgtcgaggtcagcggtaagggtgttcccgagcctgtgact
gaatttaccaacccccctatcaaccccgtccttctcgagaacgtcaagtacgctcgatac
accacccctacccctgtccaaaagtactcgattcctatcgttgccgatggccgtgatctc
atggcttgtgcccagaccggttccggtaagactggtggtttccttttccccatcctttca
gctcttttcacctatggtccttccgctcctcccgttgagcaggacactggctacggctac
aggaggacaaagaaggtttacccgacggcccttgttcttgctcctacccgagaacttgtg
tctcagattcacgaagaggcccgtaagtttgcctaccgatcgtgggtccgacctgccgtc
gtttacggtggtgccgacattggttcccaaatgcgtgccctcgaccgaggatgtgacctt
ctttccgccacccctggtcgtcttgtcgacttgattgagcgaggcaagatcagtcttgcc
aacgtcaagtacctcgttcttgacgaagccgaccgaatgctcgacatgggtttcgagcct
cagattagaagaatcgttgatgaggaagacatgcccggcgtcctcgaccgtcagactctt
atgttctccgccaccttccctcgagagattcagaaccttgctcgatgtttcctcaaggag
tacatcttcttgactgtcggccgagtcggttctacttccgaaaacattacccagcgtgtc
gagtatgttgacgaccaggacaagcgctctttgcttctcgatttgctccttgccgaacag
tctggcggtttgatccttgtctttgtcgagaccaagcgtatggccgacactctttgtgac
ttcctctgctctcgtcgacacaatgccacttctatccacggtgaccgtacccagcgtgag
cgtgaagccgctctctacgcattcaagtccggtcgtgcccccattctcgttgctaccgcc
gtcgccgctcgaggtctcgacatccccaacgtcactcacgtcatcctctacgatctcccg
aacgacgttgccgagtacactcaccgtatcggtcgaactggtcgtgcaggaaacgtaggt
acttctactgccttcttcaaccgtggaaacagcaacattggtaaagatttgattgagctc
ctcaaagaggcgaaccaagaagttcctcaatggcttgttgagatctcctccgagaggagt
tacggtggtggcggtggtgggtacagaggaggtcgaggacgaagcactggtggtggcggt
gggaggatgggcggacgagatatgcgtcaaggtggtggtggcggttatgggggcggtggg
tatggcggtggtgcaaggactggtgggggttacggaggtggcggtggtgcctcgtggggt
aatggcggtggtttcccacctgccggcggcgactctggcgcgagctggtggtaa
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