KEGG   Cryptococcus bacillisporus: 91981309
Entry
91981309          CDS       T11001                                 
Symbol
I312_101261
Name
(RefSeq) pre-mRNA-splicing factor RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
cbas  Cryptococcus bacillisporus
Pathway
cbas03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cbas00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    91981309 (I312_101261)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbas03021]
    91981309 (I312_101261)
   03041 Spliceosome [BR:cbas03041]
    91981309 (I312_101261)
   03036 Chromosome and associated proteins [BR:cbas03036]
    91981309 (I312_101261)
Transcription machinery [BR:cbas03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     91981309 (I312_101261)
Spliceosome [BR:cbas03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    91981309 (I312_101261)
 Complex B
    91981309 (I312_101261)
 Complex C
   U2 SnRNP specific factors
    91981309 (I312_101261)
Chromosome and associated proteins [BR:cbas03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     91981309 (I312_101261)
    TFTC complex
     91981309 (I312_101261)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 91981309
NCBI-ProteinID: XP_066605220
LinkDB
Position
2:complement(join(1069285..1069500,1069555..1069684,1069734..1070092,1070140..1070265,1070324..1070530,1070579..1070867,1070918..1071294,1071344..1071834,1071883..1072241,1072289..1072467,1072519..1072721,1072771..1072864,1072915..1073007,1073059..1073173,1073229..1073237,1073287..1073349,1073467..1073581,1073647..1073701,1073762..1073784,1073831..1073981))
AA seq 1217 aa
MHLLNLTLSSPTNVSTAVVGSFSGSKSQEILCVRGGTKLEIFKLNATTGQLDTIVSTEAF
GTIRNIAGFRLAGMTKDYILATSDSGRLSILEFVISPTPHFESLYQEVFGKSGSRRIVPG
QFLAVDPKGRSCLVGSLEKTKLVYVLNRNTEGKLYPSSPLEAHKNHTLVTHVVGVDQGYD
NPLYAALEIDYSESDQDPTGEAYENAQKHLTFYELDLGLNHVVRKWSEPTDRRANLLVQV
PGGQNANSDRFEGPSGVLVCTEDHIIWKHMDVEAHRIPIPRRRNPLVQRGDKSRGLIIVS
AVMHKIKGAFFFLLQSEDGDLYKVWIEHNGEDVVALKIKYFDTVPVANSLCILKRGYIYV
ASEFSDQNLYQFQSLAEDDGEQEWSSTDYPENGNIDGPLPFAFFDPQPLRNLLLVDNVPS
LDPITDAHVVNLLGASSDTPQIYAACGRGARSTFRTLKHGLDVAEMVSSPLPGVPTNVWT
LKLTEDDEYDSYIVLSFPNGTLVLSIGETIEEVNDTGFLSSGPTLAVQQLGNAGLLQVHP
YGLRHIRAADRVDEWPAPPGQTIVAATTNQRQVVIALSTAELVYFELDPEGSLSEYQEKK
ALPGNATCVTIAEVPEGRRRTPFLAVGCDNQTVSIISLEPDSTLDTLSLQALTAPPTSIC
LAEIFDTSIDKNRATMFLNIGLMNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRANVQ
GQPSVMAFSSRTWLLYTYQDMLQIQPLIYDTLEYAWSLSAAMCPDGLIGISGNTLRIFSI
PKLGEKLKQDSTPLTYTPRKFISHPFNSVFYMIEADHRTYSKGAIERIVKQKESEGRRVD
TLLLDLPANEFGRLRAPAGHWASCVRVLDPLANETIMAFDLDEDEAAFSIAIAYFERGGG
EPFLVVGTGVKTTLQPKGCKEGYLRVYAIKEQGRVLEFLHKTKTDDIPLCLAGFQGFLLA
GIGKSLRLYEMGKKALLRKCENNGFPTAVVTINVQGARIIVGDMQESTFYCVYRSIPTRQ
LLIFADDSQPRWITCVTSIDYETVACGDKFGNIFINRLDPSISEKVDDDPTGATILHEKS
FLMGAAHKTEMIAHYNIGSVVTSITKIPLVAGGRDVLVYTTISGAVGALVPFVSSDDIEF
MSTLEMHMRTQDISLVGRDHIAYRGYYVPIKGVVDGDLCESFSLLPYSKQQAIASDLDRS
VGDVLKKLEQMRTSSAF
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgcacctcctcaacctcaccctatcttccccgacaaacgtctccacagctgtcgtcggc
agtttttccgggtcaaaaagccaggagatcctgtgcgtcagaggaggcacaaagttggag
attttcaagttgaatgccacgaccggacagttggacactattgtctctacagaggcgttt
ggaacgatcagaaatattgcaggattcagattagctggtatgacgaaagattacatcttg
gcgacgtcagactccggcagattatcaattctcgaatttgtcatctcgcccacgccgcat
tttgagagcctgtatcaggaggttttcgggaagagtggtagcagacgtatcgtccctggc
caattcttggccgttgaccccaaaggtagaagttgtcttgttgggtccttggaaaagaca
aagctagtgtatgtcttgaacagaaataccgaaggaaagctttatccatcttctcctctt
gaggcccacaagaatcatactctcgtgactcacgtagtcggtgttgaccagggatatgac
aaccctttgtatgctgctttagaaattgactactccgaatccgatcaggacccaacagga
gaggcgtacgaaaatgctcagaagcacttaacattctacgagttggatcttggattgaac
cacgttgtgcggaaatggagtgaacccacagacagacgggcaaatcttctggtgcaagtt
cccggtggccaaaacgccaactctgacagatttgaaggcccttcaggtgttcttgtctgc
acggaggaccacatcatctggaagcacatggatgttgaggctcacagaatacccatccct
agacggcgaaatcctcttgtgcaaagaggtgacaaaagtcgaggcttaatcatcgtttca
gcggttatgcacaaaatcaagggtgcctttttcttcctactccagtctgaggatggtgac
ctgtacaaggtctggatcgagcacaacggtgaagatgttgttgcactcaaaatcaagtac
tttgacaccgttcctgtggcaaacagtctttgtatcttgaagagaggttatatctatgtg
gccagcgagttcagtgaccaaaacttgtaccagttccagagtcttgcggaagatgacggc
gagcaagagtggtcatctaccgattaccctgagaatggtaatattgatggacctcttccc
tttgctttctttgacccgcaacctcttcgtaaccttctccttgttgacaatgttccttct
ttggaccccataactgatgcccacgtcgtcaaccttctcggtgccagttctgacactccc
caaatatacgcagcttgtggacgcggtgccagaagtacttttaggacgttgaaacacgga
ttggatgttgcggagatggttagctcgccactacccggtgtacctaccaacgtctggaca
ttgaaactgactgaagatgatgaatacgattcctacattgtcctgtctttccccaacggc
actttagtcctttctatcggtgaaacgattgaagaagtcaacgacactgggttcctttct
tcaggccctactcttgctgttcagcaacttggtaacgccggtcttttacaggttcaccct
tacggtcttcgacacattcgagctgccgaccgagtagatgaatggcctgctcctccagga
caaactattgttgctgctaccacgaaccagcggcaggtcgtgattgcgttgagtacggcc
gagttagtatactttgagcttgatcccgagggaagcttgagcgagtaccaagagaagaag
gcgttgccaggtaacgccacttgcgtgactattgccgaggtgcctgaggggagaagaagg
acaccgttcttggctgttggttgcgacaatcaaacagtgtccatcatctctttggaacca
gatagcactctggatactttgagtcttcaggccctcactgctccccccacttcgatctgt
ctcgcggagatctttgacaccagtattgacaagaaccgtgctacgatgttcttgaacatc
ggtctcatgaacggcgttctgcttcgtaccgttgtcgaccctgttgacggatctctctct
gacactcgacttcgattcctcggtgccaagcctcccaaacttgttcgtgcgaacgttcag
ggtcagccgagtgttatggcattctccagcagaacctggctgctctacacgtaccaggat
atgttgcagatccagccacttatttacgacactctggaatacgcctggtcactctcagcg
gctatgtgtcctgatggattgatcggtatctcgggtaatacactgagaattttcagtatt
cccaaattaggtgaaaaacttaaacaagactccaccccattgacttatacacctcgcaag
ttcatcagccatccctttaattctgtcttttacatgatagaagcggatcaccgaacatac
tcaaaaggtgccattgagaggattgtcaagcagaaggagtcggaaggtagaagggttgat
accttattgttggatctccctgccaatgagtttggccggcttagagcccctgccggccat
tgggcatcttgtgtgcgagtattggatcctcttgctaacgaaaccattatggcctttgac
ctcgatgaagatgaagctgccttttcgattgctattgcctactttgaacgtggtggcggc
gagccgttcctcgtggttggtactggtgtaaagacaactttgcagcccaaaggatgtaaa
gagggttacttgagagtatatgcgattaaggagcaagggagagtccttgagtttttgcac
aagacaaagaccgatgacataccgctttgcttggctggcttccaaggctttctgttggcg
ggcatcggcaagtctctgagattatacgagatgggtaaaaaggcattgctgagaaagtgt
gagaacaatggattccccacggctgtcgttaccatcaacgtccaaggagcccgaataatc
gtcggtgacatgcaagaatcaactttctactgtgtctatcgctccattcccacccgacag
ctcctcatttttgccgacgattcccaacctcggtggatcacttgtgtcacaagcatcgat
tatgagaccgtcgcatgtggtgacaagttcggaaatatcttcatcaatcgactggaccct
agtatatcagagaaggtggatgatgaccctaccggtgctacaatcttgcacgagaagagt
ttcctgatgggtgcagcacacaagacagagatgatagcgcattataatattggaagtgtc
gtcacttctataactaaaatcccattggtagccggtggacgagatgtgttggtctacacc
actatctcaggcgctgttggtgcccttgttcctttcgtgtcttcagacgacatcgaattc
atgtcaactctcgaaatgcacatgcgaacacaagacatttctctagttggccgagaccac
attgcttacaggggttactatgttcctatcaaaggcgttgttgatggggatctgtgtgag
agctttagtctcttgccttactctaagcaacaagcaatcgcgtcagatttggataggagc
gtgggtgatgttctgaagaagcttgagcaaatgaggacaagcagtgcattttaa

DBGET integrated database retrieval system