Cryptococcus bacillisporus: 91982503
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Entry
91982503 CDS
T11001
Symbol
I312_102456
Name
(RefSeq) uncharacterized protein
KO
K12855
pre-mRNA-processing factor 6
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91982503 (I312_102456)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cbas03041
]
91982503 (I312_102456)
Spliceosome [BR:
cbas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
91982503 (I312_102456)
Complex C
U5 SnRNP specific factors
91982503 (I312_102456)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
HAT_PRP39_N
TPR_19
TPR_16
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_6
TPR_21
ANAPC3
TPR_CcmH_CycH
ARM_TT21
FAT
TPR_12
Cdc6_lid
Motif
Other DBs
NCBI-GeneID:
91982503
NCBI-ProteinID:
XP_066606407
LinkDB
All DBs
Position
4:complement(join(194762..194905,194967..195232,195291..195928,195980..197058,197113..197199,197248..197518,197566..197808,197863..197903,197958..198017))
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AA seq
942 aa
AA seq
DB search
MSNVGTVKHIPKEVRYNFLNMAAPASYVAGLGRGASGFTTRSDIGPARAGPSAEVVAEAQ
ARRGEEEIPDPDAFQDPDDERNLFAGTVYEADDEEADRVWDSVDARMDARRKARRDAAEA
KAAAEERARNPKLQTQFADLKRSLSSLNDADWDAIPEAGNLTGKRRKANLRMEENQNGRS
YNVSDTVIADAVKRNAMVGELDPAEAGIGIDGTETDLVSIGNARDRVLSLQLDQATRDAS
NGTSTSIDPKGYMTALNSQIVQTDAQIGDIKQARQLLQNLIQSNPKHAPGWIAAASLEVH
AKKMVAARKIIAEGCEKCPKNEDVWFHAAELNTPENAKVILGRAIQHVPQSVKIWLKAAS
LETDINAKKRVLRKALEFVPNSVGLWKETVNLEDDPEDARVLLTRAVEVIPNSVELWLTL
ARLETPENAKQVLNSARKRIPTSHEIWIAAGRLAEQSPSAVAVKPEIKMEDEAEYEAEQR
KKLAQQVNKLMAGAVNSLRKNQVILSREQWLQEAEKCEQDGSPLTAQAIVKATIAQDVEE
EDRRSVWIEDAERATKGGFYEVARACYAVTLEAFPTTPSVWRKAAEFEKAHGTPDAVQEI
LAQGSQQCPHAEVLWLMAAKEKWVGGDIPGAQAILAEAFKANEDSESIFLAAAKLAAETG
EMEAAIQILEKAKAQADTERVWMKSAVLLRQLGKLDEALSTLEVAIKKFASFDKLHMIRG
QIYESRNEVALARNAYAQGCRSCPKSIPLWILSARLEEKAGVTIKARALLEKARLHNPKN
DELWAESIKIEERTGSTQQAKSVLARAMQECPASPLLWSMAIFMEAPQQRKGRSVDAIKK
AGEHPAVILAVARNFWSERKIEKTRQWMANAITADEDWGDAWGYWLKFERQHGERERQEA
VIEKCIAASPHHGPVWQSVSKDLANVGKSTREIMELVADKLE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgttggtacagtgaagcatattcccaaggaagtgcgatacaacttcctcaac
atggccgctccggcgagctatgttgctggtctcggtcgaggtgcttctggtttcacaact
cgatccgatattggtcccgcccgagctggccccagtgcagaggttgttgcggaagctcaa
gctcgccgtggtgaagaagaaatccctgatccagatgcttttcaagatccagatgacgaa
aggaacttgtttgcaggtacagtttatgaagcggatgatgaagaggccgacagggtgtgg
gacagcgtcgatgccagaatggatgcgagaaggaaggccagacgggacgcagcagaagcg
aaagctgcggctgaagagcgcgctcgcaatcctaaacttcaaacacaatttgcagactta
aagcgatctctctcgagccttaacgatgctgactgggacgccatccctgaagcaggaaac
ttgactgggaaaaggagaaaagccaacttgcgaatggaagaaaatcaaaatggaagaagc
tacaatgtcagcgacactgtcatcgcggatgccgtgaagaggaatgctatggtaggagag
ttggatccggcggaagccggtattggtatcgatggcaccgaaacagatcttgtctcaatc
ggtaatgccagagaccgagtattatcactgcagcttgaccaagccacacgagatgcctca
aacggcacttctaccagcatcgaccctaagggctatatgacagctcttaacagtcaaatt
gttcaaacagacgctcaaatcggtgacatcaagcaggctcgccaactcttgcaaaacctc
atccagtctaatccgaaacacgcccctggatggatcgccgctgcctccttggaagtacac
gccaaaaagatggtcgctgctagaaagattattgctgaaggatgtgagaagtgtccgaag
aacgaggatgtttggttccatgccgctgaactcaacacaccggagaatgcgaaagtcatt
ttgggtcgagctatacagcacgttccacaatctgtcaaaatctggctcaaggctgcctct
ctggaaacagacatcaacgccaagaagcgcgttctccgaaaagctcttgaattcgttccc
aactctgttggattgtggaaagagactgtcaacctcgaagatgatcccgaagacgcccgt
gtcctccttactcgtgctgtcgaagtcattcccaattctgtggagctgtggctcacttta
gcgcgtcttgaaactcctgaaaacgctaagcaggttctcaattctgcacgcaagcgtatc
cctacctcccacgaaatttggatcgctgccggtaggcttgctgaacaatcaccttccgcc
gtggctgtcaagccagagatcaagatggaggatgaggcggagtacgaggctgagcagaga
aagaagcttgctcagcaggtcaacaagctcatggctggtgctgtcaactcattacgcaaa
aatcaggtcatcctttcgcgagaacagtggttacaagaggccgagaaatgtgaacaagac
ggctcacctcttacagcgcaggctattgtgaaggctaccatcgcccaggacgtcgaagaa
gaggacaggcggtctgtctggattgaagatgcggaaagggcaacgaaaggcggattctac
gaggtcgcgagggcttgttacgctgtcactctcgaggctttccctactaccccgtcagtc
tggagaaaagccgctgagttcgaaaaggcccacggcacacccgatgctgtccaagaaatt
ctcgcccagggctcccaacaatgtccccatgcggaggtcctctggcttatggccgcgaaa
gagaagtgggtcggcggtgatatccccggcgcacaggccatccttgccgaagctttcaaa
gcaaacgaggattccgaatctatcttccttgctgctgccaaactcgcagccgagaccggc
gagatggaagctgctatccaaattcttgagaaggccaaggcacaggcagacacagagagg
gtctggatgaagtcggcggtactattgaggcaattgggcaagttggacgaagctctttca
actttggaggttgctatcaagaaattcgcttcgttcgacaagttgcacatgatccgagga
cagatctacgagtcccgtaatgaggttgcgctcgcccgaaatgcctatgctcaaggatgc
cgatcatgtccgaaaagtatcccattatggatcttgtcggctcgtctggaagagaaggca
ggtgtgacaattaaagcgagggcgttgctcgaaaaggcaaggttgcataatcccaagaat
gatgaattatgggcggaaagtatcaagattgaagaacgaacgggcagcacacagcaggcg
aaatctgtccttgctcgagcgatgcaagagtgtcccgcctctcctcttctttggtccatg
gcaatcttcatggaggctcctcaacaacgaaaaggtcgttccgttgacgccatcaaaaag
gccggcgagcatccagccgttatcttagcggtcgcgagaaacttctggagtgaaaggaag
attgaaaagacaagacaatggatggctaacgctattacggccgatgaagattggggagat
gcttggggatattggctgaagtttgagaggcagcatggagagagagaacgtcaagaagcg
gtcattgaaaagtgcatcgcggcctcaccgcaccatggcccggtgtggcagtcggtatca
aaagatttggccaatgttggcaagtctacaagagagataatggaattagtcgcagacaaa
ctagaataa
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