Cryptococcus bacillisporus: 91982608
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Entry
91982608 CDS
T11001
Symbol
I312_102561
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91982608 (I312_102561)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbas03021
]
91982608 (I312_102561)
03019 Messenger RNA biogenesis [BR:
cbas03019
]
91982608 (I312_102561)
Transcription machinery [BR:
cbas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91982608 (I312_102561)
Messenger RNA biogenesis [BR:
cbas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
91982608 (I312_102561)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
DUF7340
zf_UBZ
zf-Tbcl_FmdE
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
91982608
NCBI-ProteinID:
XP_066606512
LinkDB
All DBs
Position
4:join(455800..456033,456102..457069,457117..457291,457356..457592,457642..457836,457888..457896)
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AA seq
605 aa
AA seq
DB search
MAYQAYPAYQQALYYPPPPVQPTTDVFRRQYADRLRALTFNSRPIIQDLSMLAMAARDRN
DWDGMQAVVEEIESAVLRALPQQKLPLLYLLDSISKNVGAPYTTRLLQPVVPRLYIKTYR
EVDGVTKTKMEEMIGLWRTGGPGGSELYGSHVREQVERELFGSAGIQNFKAPNRQQVQVL
LNAALDNKRREVAMRPGDVVLGRQLNALLGIGELLSTTNVQPQELSMIVEQLKSMAPPSV
APTPTQISVTSSWGPSPSVNDLAPSNLPPFPPKLPAVNGNGYANAALPPFPSNVPTPLGT
ISTPPMTSSQTPVHGSQRSSTPVMASASLAPVPSIIPSMPSLPVDVARILQTLNKSGIGS
QPQTPDVERGTPGPSMVPTTEAYEDMILRLDIKLQSIDLNAPHKLSFAHLSHRCQQCGMR
FPSANTAFDAHMDWHFRRNKKEREPGGRGAHRRWLPRVEQWINDAITLPTTAASTSQTEK
ATISTERLAQLRQKWVKVPQDSKKAASVCPVCKEAFKAEWSDSEEEWIWKNALAINGVFY
HATCRAEQTSALKRLKAAEPNRRTSSSASPRTTPSNEGLKPEAQKRKIEGMDVEHEESAK
RVKGR
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcctatcaagcctatcctgcctatcaacaggccctatattaccctccacctcccgtt
cagcctacaactgatgtatttcggaggcagtatgcagatagattgagggcgctcacgttc
aactcgaggcctattattcaagatttatcgatgttggcaatggcggcacgagatcgcaat
gattgggacggaatgcaggctgttgtagaggaaatagagtcggctgtcttgagagctctt
ccccaacagaagcttcctttgctttatttgcttgattccatttccaagaatgttggagcc
ccttatacaacccgtctgcttcagccagtcgtgcctaggctatatataaagacgtatcgt
gaggtcgacggcgtgaccaagacaaaaatggaagaaatgattggtctctggcgcactgga
gggcctggcggttccgagctgtacggttctcatgtcagagaacaggtggaaagggaatta
tttggttcagcgggcattcaaaacttcaaagctcccaatcgacaacaagtccaggtgctt
cttaatgcagcgttggacaataaacgacgtgaagtggcgatgagacctggtgatgtggtt
cttggtcggcagttgaatgcattgttgggtatcggggagctgcttagcacgacgaacgta
caacctcaggagctgagtatgatagtagagcagttaaagtcgatggcgcctccatcggtg
gctcctactccgactcaaatatctgtcacatcttcttggggaccctctccctctgtgaat
gacttggccccctcaaatctcccgcccttccctccaaaacttcccgctgtcaatggcaat
ggatatgctaatgctgccttaccaccgttcccttcgaatgtaccaacaccactcgggact
atctccacacctccgatgacaagctcccaaactcctgttcatggcagccaacgctcgtca
actccggtcatggcatctgcttctcttgctcctgtaccctctattataccatccatgcca
agtcttcctgttgatgtcgccagaattcttcaaactttgaacaagtcagggatcggtagt
caaccgcagaccccggatgttgaaagagggacaccaggaccaagtatggtccctacaacc
gaggcttacgaggatatgattttgcgattggatataaagctacagtcaattgatctaaat
gctccccataaattgtcttttgctcacctttcccaccgttgtcagcaatgtggtatgaga
tttccttcagccaatactgcatttgatgcccacatggattggcatttcaggagaaacaag
aaagagcgcgagccgggaggcagaggcgcccatcgaaggtggcttccgcgggttgagcaa
tggatcaatgatgctatcactcttccaactaccgcggcatcaacaagtcaaactgaaaag
gctacgatctcaacggaacggttggcgcaactgcgacaaaaatgggtgaaggtgcctcaa
gactctaaaaaggccgcgtcggtgtgcccagtgtgcaaagaagctttcaaagcagaatgg
tctgatagtgaagaggaatggatatggaaaaacgcattagccatcaatggcgtcttttat
catgcaacttgtcgagcggagcaaacatctgctttgaaacgtctcaaagctgccgaacct
aatagacgcacatcttctagtgccagccctagaacgacaccttccaatgaaggactgaag
ccggaggcgcaaaagaggaagattgaaggcatggatgtagaacatgaagagagtgccaaa
agagttaagggtcgttaa
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