Cryptococcus bacillisporus: 91983010
Help
Entry
91983010 CDS
T11001
Symbol
I312_102964
Name
(RefSeq) mRNA 3'-end-processing protein YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
91983010 (I312_102964)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbas03021
]
91983010 (I312_102964)
03019 Messenger RNA biogenesis [BR:
cbas03019
]
91983010 (I312_102964)
Transcription machinery [BR:
cbas03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
91983010 (I312_102964)
Messenger RNA biogenesis [BR:
cbas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
91983010 (I312_102964)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
Torus
zf-CCHC
zf_CCCH_4
zf-CCCH_4
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
91983010
NCBI-ProteinID:
XP_066606905
LinkDB
All DBs
Position
4:join(1428971..1429109,1429159..1429606,1429664..1429988,1430043..1430129)
Genome browser
AA seq
332 aa
AA seq
DB search
MAAASNSAPLDPKLGRAADFVRPDFHQVNLDLENYLKTERNFKLDADQQICPLSITPLGC
PLPPSQCPYRHTTPSQFNFKPPPPLPAHPREREKKLTVCKHYLRNLCKMGDNCEYTHDFN
LRTMPECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCEA
YAAGFCPDGKDCKLAHPSPNRPPPESYINPIPPDPEAFNGPPPQLPAGYGRWREYKYDPN
AVVVPAAAWVEGGSLSGWRAGGFLSANARRDNQRNRDNDDEGGRGGGGERKGGWQKDLST
VLCFRCNQYGHFANNCPNQYVPGDRGGGRRRE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcctcgaattccgcaccattagatccaaagctcggacgagcagcagatttt
gttcgccctgattttcaccaagtcaatctcgacctggaaaactacctcaaaactgagcgc
aacttcaagctcgacgcagaccaacaaatatgtcccctgtccatcacacctctaggatgc
ccccttccgccttcacaatgtccatatcgtcacactactccctcacaattcaatttcaag
ccaccacctcctctcccggcccatcctcgagagcgagaaaagaaactaacggtctgcaag
cactatcttcgaaatctctgtaaaatgggagacaattgcgagtacacgcacgactttaac
cttcgcacgatgccagagtgtatatggtttgtcaaacaaggcaaatgtgagctgggagga
gaatgcctgtatttccatcccagagacagaagagtcgagtgtccggattacaacagagga
ttttgcgtactaggccctaattgtccgaggaagcatataaggaggagactgtgtgaggca
tatgctgctggattttgccctgatggcaaggactgcaaattagctcatccgtctcccaac
cgaccgcctccagagtcatatatcaaccctatcccgcctgatcccgaagcctttaatggc
ccaccaccccaactgcctgcaggctatggtcgttggcgggaatacaaatatgatcccaat
gcggtggttgttccagctgcggcgtgggttgaaggtggaagtttgtctggttggcgggct
ggaggattcctgtccgcgaatgcaagaagagataatcagaggaatagagacaatgatgat
gaaggtggacgcggtggtggaggagagagaaaaggtggctggcaaaaagaccttagcacg
gtactttgcttcaggtgcaaccagtatggccactttgccaataattgtcccaatcaatat
gtgcctggagacaggggaggcggtagacgacgagaatga
DBGET
integrated database retrieval system
