KEGG   Cryptococcus bacillisporus: 91983136
Entry
91983136          CDS       T11001                                 
Symbol
I312_103091
Name
(RefSeq) uncharacterized protein
  KO
K12599  antiviral helicase SKI2 [EC:5.6.2.6]
Organism
cbas  Cryptococcus bacillisporus
Pathway
cbas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbas00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    91983136 (I312_103091)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbas03019]
    91983136 (I312_103091)
Enzymes [BR:cbas01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     91983136 (I312_103091)
Messenger RNA biogenesis [BR:cbas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     91983136 (I312_103091)
  mRNA degradation factors
   3'-5' decay
    Ski complex
     91983136 (I312_103091)
SSDB
Motif
Pfam: DSHCT DEAD Ski2_N MTR4_beta-barrel MTR4-like_stalk ResIII Helicase_C DEXQc_Suv3 TerB_C EpuA HTH_Tnp_ISL3
Other DBs
NCBI-GeneID: 91983136
NCBI-ProteinID: XP_066607024
LinkDB
Position
5:complement(join(68757..68765,68820..68839,68894..69062,69118..69585,69638..69865,69926..70056,70105..70234,70287..70472,70530..70892,70942..71009,71066..71161,71212..71813,71861..71967,72016..72120,72170..72302,72356..72501,72554..72586,72629..72724,72775..72971,73021..73376,73438..73655))
AA seq 1286 aa
MEQATDLEDSVFLELLNTAVNPSSVDAIPSDQLAASLGIDGPLNREQALELLENEVLAPA
HEFQGHELGYWQVQPPISLPTPHLTLSPLYQTHTVAPSFRGINGEFTHWREALAPKPPAH
PTLSSSTTRAPGSLQNFVRGKGSYAPFLPGGLQAAAKPEEDEDEDEDEDEDEEVGWKTRA
PGMKRGAKLDGADDFLAEMLGQQSITAKAKRRRRDGEFASPQLTVSRLGDKDEDVDGIDL
KPAHPSDKNIDDLLPVGRLPAPPSSKKQFKAVAKKDWAHVVDVNQKLENFSELVPEMAKE
YPFELDNFQKEAVYRLELGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALS
NQKFRDFKTTFEPSTVGILTGDVQINAEGSCLIMTTEILRSMLYKGADLIRDVEFVIFDE
VHYVNDAERGVVWEEVIIMLPEHVNIILLSATVPNTKEFADWVGRTKKKDIYVISTPMRP
VPLEHFLWAGRETHKIVSSQSKFLMEGYSSASDALRRKQDKEREANGLPPLQRTGGRGGA
PVKSKDLPTGKSAPFTRVGAGRNHTNRGGGNGPPQAAFGGGRGGRGGGRGGFGGSSRPSH
VLDQNIWTHLISYLKKNTLLPVVNFVFSKKRCEEYAQTLSLDLCTAKEKSEVHITWERAL
TRLKGEDKNLPQILRMRELLGRGIGVHHGGLLPLVKEVVEILFARGLVKVLFATETFAMG
VNMPAKSVVFSGIRKHDGTSFRNLLPGEYTQMAGRAGRRGLDSTGTVIILSGDELPSVEE
LNEMMLGVPNRLSSQFRLTYNMILNLLRVEALKVEEMIKRSFSENATQKMAPEQQRVIAQ
TEKELAKLPKLECDVCNADIDAFYNLSTEASRLNAQFLKRASWSNQSGKLFVPGRVVVLR
NAHSPGNLAVILGNHPNLGPDGERPDVKAFRVLVLVTPGQKSGKEDLSVEELTPRWPPIL
PKGPFPNPTAERTVVDTSSISFVINHILKYDFYRLNSRESPSDIQQALNDLSKLHEELSV
LPELPEADWSRLRDIDIQSLLKERTNAAGRLSKLGCQLCENFADHYATLHERKQVEQRIQ
KLKLQLSDQNLELLPDYESRVEVLKRLSFIDDNATVLLKGRVACEINSAPELILTELILE
NILSDYTPEEVVALLSIFVFVEKTESQPIIPTKLQDGLDVIYNIAEQVEREQDSCQVQHD
EFATKYKPGLVEVVYEWARGMPFNEITNLTDVPEGTIVRVITRLDETCREVRDAARVIGD
ADLFKKMEEAQSLIRRDIVFAASLYL
NT seq 3861 nt   +upstreamnt  +downstreamnt
atggagcaggcgactgatctcgaagattcggtctttctagagctcctcaatactgctgtc
aatccttcttctgtcgatgcgataccgtcagaccagctcgccgcatcattagggatcgat
ggccctttgaacagagagcaagccttggaattattggaaaatgaagttttggctcctgca
catgaatttcaagggcacgaacttggatactggcaagtgcaaccacccatcagtcttcct
acgccgcacttgaccctttctcctctgtatcagacgcacacggtagctccgtcgttccga
ggtatcaatggggagttcacgcattggcgagaagctcttgctcctaaacccccagcccat
cccaccttgtcttcatctacgaccagagcccctggttctctgcagaatttcgtcagagga
aagggatcatatgctcctttccttcctggtggtttgcaggccgccgccaaaccggaagaa
gatgaggatgaagacgaagatgaagatgaagatgaagaagtggggtggaaaacaagggca
cctggaatgaaaagaggtgccaagctcgatggagcggatgatttccttgctgaaatgcta
ggtcagcagtcaataactgcaaaggccaagagacgtcgacgggatggcgaatttgcttca
ccacagttgactgtctcaagactaggtgacaaggatgaagatgttgacggaatcgatctc
aagcctgctcatccttcagataagaacatcgatgatttattaccagtaggacgccttcct
gctcctccatcttctaagaaacagttcaaggccgtcgcaaagaaggattgggcccatgtt
gtggatgtcaatcaaaaactggagaatttcagtgaactggtacctgaaatggcaaaagag
tatcctttcgaactcgataacttccaaaaagaagctgtttacagactcgaactgggagac
agtgttttcgttgctgcccatacatctgcaggtaaaacggtcgttgctgaatatgctatt
gcccttgcagcgaaacatatgaccaaagccatttatacgtctcccatcaaagctctttcg
aatcaaaaatttcgagacttcaaaaccacgtttgagccttcaactgttggtatcctgacg
ggtgatgtccaaatcaatgccgaaggaagctgtctgattatgacaacggagatcttgaga
agcatgttgtacaagggtgctgaccttatccgggatgttgagtttgtcatcttcgatgag
gtccattacgtcaatgatgccgagcgaggtgtagtttgggaagaggttattataatgctt
ccagaacacgtcaacatcatcttgctttctgccaccgtaccaaacaccaaggagtttgca
gactgggttgggcgaaccaagaagaaggacatctatgtcatctctactcctatgcgacct
gtccccctagaacacttcctctgggccggccgagaaacccacaaaatcgtcagctcgcaa
tctaagtttcttatggaaggatactcctcagctagcgatgctcttcggcgaaaacaggat
aaagaaagagaagccaatggcttgccacctctacaacgtaccggcggtcgaggaggagcg
ccagttaaatcgaaggacctgccaacggggaagagcgcaccctttacccgtgttggagct
ggcaggaaccacaccaatcgtggaggtggtaatggcccaccacaagctgctttcggcggt
ggacgaggcggacgtggaggcggtcgaggcgggtttgggggtagttcgcgtccttctcac
gtgctcgatcaaaatatttggactcatctcatcagctacctcaagaagaacaccctctta
ccggtcgtcaactttgtgtttagtaagaagagatgtgaggagtatgcgcaaacgttaagc
ctagatctttgtaccgcgaaagagaagagtgaagtgcatattacttgggaaagggcattg
acgcggctgaagggtgaggacaaaaaccttccccagattttgcgtatgcgagaactactg
ggccgaggtatcggtgttcaccacggtggtcttttgccattagtgaaagaggtggtcgaa
atcttgttcgctcgaggccttgtaaaggtcctctttgccaccgaaacctttgccatgggt
gttaatatgcccgcaaaatcggtcgtgttctctggcattcgtaaacatgatggcacttct
ttccgcaaccttcttcctggagagtacactcaaatggctggtcgagccggtcgtcgtggt
ctcgatagcacgggaactgtcattattctcagcggcgatgagcttcctagtgtcgaagag
ttaaacgagatgatgcttggtgtgcccaacaggctctcatcgcagttcagattgacttat
aacatgattttgaacttgctgagagtagaggcgctcaaggtggaggagatgattaagaga
agtttctcagaaaacgcgacgcaaaagatggcgccagagcagcagagggtcatcgctcaa
acggagaaagaactcgcgaagcttcccaagcttgagtgtgatgtttgcaatgccgatatt
gatgctttctataacctctcaactgaagcttcacgactcaacgcgcaattcctcaagaga
gcttcttggtccaatcagtctgggaagctgtttgtcccaggcagagtggtggttttacgc
aatgcccattcccctggcaatcttgctgtaatcttgggtaatcatcctaaccttgggcct
gacggcgagcggcccgatgtaaaggcgtttagagttcttgtgcttgtaacacctgggcag
aagtccggcaaagaagatctttccgtagaagaattaactcctcgttggccgcctatcctc
ccgaaaggaccattccccaaccccactgccgaacggacagtggtcgacacttcctctatc
tccttcgtgattaatcatatcttgaagtacgacttctatcgcttgaatagtagagaatct
ccttccgatattcaacaagctttgaatgacctcagcaaacttcatgaagagctttcagtc
ctgcctgaactgcctgaggccgactggtcaagattgagagacatcgatatccagtcgttg
cttaaggaaaggacaaatgcggccggcaggctatcgaaattgggctgccagctgtgtgag
aactttgcggatcattatgccactctacatgagcgaaagcaggtggagcagcgtattcaa
aaactcaaactccaactctcagatcaaaaccttgaactgcttcctgactatgagtctcgg
gtcgaagttctcaaacggctgtcattcatcgacgataacgccacagttcttctcaaggga
cgcgtggcttgtgagatcaactctgcacccgaactcattcttacggaactcattcttgaa
aatattctctccgattacacacccgaagaggttgttgctcttctttcaatcttcgtgttc
gtggagaagacggagtctcaacccataatcccaaccaaactgcaggatggtctagacgtc
atttacaacattgcagagcaggtcgaaagggagcaggactcctgtcaagttcaacacgat
gagtttgccaccaagtataaacctggtctggtggaagttgtttatgaatgggcaagagga
atgcctttcaacgagatcaccaacttgacggatgtaccggaaggaacaatcgtgcgagta
attacaaggctggacgagacttgtagagaagttagggacgcggcgagagtcatcggcgac
gccgatctgtttaagaagatggaggaagcgcagagtttgattcgaagagacattgttttt
gctgccagtttgtatctctaa

DBGET integrated database retrieval system