KEGG   Cryptococcus bacillisporus: 91983285
Entry
91983285          CDS       T11001                                 
Symbol
I312_103240
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
cbas  Cryptococcus bacillisporus
Pathway
cbas03030  DNA replication
cbas03410  Base excision repair
cbas03420  Nucleotide excision repair
cbas03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cbas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    91983285 (I312_103240)
   03410 Base excision repair
    91983285 (I312_103240)
   03420 Nucleotide excision repair
    91983285 (I312_103240)
   03430 Mismatch repair
    91983285 (I312_103240)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cbas03032]
    91983285 (I312_103240)
   03400 DNA repair and recombination proteins [BR:cbas03400]
    91983285 (I312_103240)
Enzymes [BR:cbas01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     91983285 (I312_103240)
    6.5.1.6  DNA ligase (ATP or NAD+)
     91983285 (I312_103240)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     91983285 (I312_103240)
DNA replication proteins [BR:cbas03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    91983285 (I312_103240)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     91983285 (I312_103240)
DNA repair and recombination proteins [BR:cbas03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     91983285 (I312_103240)
   NER (nucleotide excision repair)
    Other NER factors
     91983285 (I312_103240)
   MMR (mismatch excision repair)
    Other MMR factors
     91983285 (I312_103240)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase FAS_N
Other DBs
NCBI-GeneID: 91983285
NCBI-ProteinID: XP_066607170
LinkDB
Position
5:complement(join(441792..441959,442012..442359,442416..442646,442702..442884,442942..443153,443214..443299,443358..443433,443484..443646,443699..443800,443856..443996,444056..444227,444278..444346,444398..444713,444772..444909,444957..444996))
AA seq 814 aa
MHFDKTRTPRNMSDTDSPVKASIRKKRTVILSDDEDEGLSPPVTKQQLSSPRHSHASNEE
TEPPRKIAKTSSKMAPIFAPKEKKEKPPPKASSTSPKAPTKKTEVKNKDEKPLASIFTKS
IRNPEPKDDDEISDEVKQKGKDEEEEDEVYDENEDKQEGEAAAKLASIFTKNQKSVPVAD
KGWKDGEAVPYSALVSTFEKIEATTKRLEILELLTQFLLVVAKRDTATDTKGSMLLKVVY
LCINRLCPDYMGIELGIGESLLVKAIAESTGRAMPKIKEDLKKEGDLGKVAMNSRNTQST
MFKPKALTVPYVFQCLTEIAKATGNASQAKKVGIIKKLLAACQGTEAKFIIRSLEGKLRI
GLADKTVVVALAHAIVLKTIGDKKPSPEKLAIMLEQGAETVKAVYSELPSYDLVIPALLQ
DGVEGLRKHCKLTPGVPLKPMLAKPTKAITEVLDRFEGKEFTCEYKYDGERAQVHLLEDG
TISVFSRNSENMSAKYPDLVDQIPKALKPTAKTFVIDAEAVAYDLETKKILPFQDLSRRK
RKDVKAEDITVRVHIFAFDLLYLNGESLLAKELKERRRLLQEHFQPVESEFAFAKSSDGS
TSEEIQAFLEESVKDGCEGLMVKMLTSGASTYEPSRRSMNWLKLKKDYLSGVGDSLDLVV
VGAYHGKGKRTAVYGAFLLACYDPDSEHYQTICKIGTGFSEEILAQFYELLKPLELGVVR
GDIEVGGAKPDVWFEPRVVWEVLTADLSLSPVYAAAHGVIDSRGISLRFPRFIRIRDDKS
ADEATTAEQVSEFYQRQVSAGGKKGPGADVDDFW
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgcatttcgacaagacgcgtacaccaagaaatatgagtgacacagactccccagtgaag
gctagcatcaggaagaagcggacggttatcctgtcggatgacgaggacgaaggacttagc
ccacctgtgaccaaacagcagctttcttctcccagacattctcatgcatctaatgaagag
acggagcctccccggaaaattgcaaaaacatcatccaaaatggcgcctatcttcgctcca
aaagagaagaaagaaaaaccacctcccaaggcctcatcaacttcgcctaaagcacccacc
aagaagacagaagtaaagaacaaggatgaaaaaccacttgcatcaatattcacaaaatcg
atacgaaatcctgagcctaaggatgacgatgagatatccgatgaggtgaaacaaaagggg
aaagatgaagaagaggaggatgaggtatatgatgagaatgaggataagcaggaaggagag
gccgccgccaaactggcttcgatctttaccaagaaccaaaaatctgtccccgtggctgac
aagggctggaaagacggtgaagcggtcccgtattccgctctcgtgtcaacctttgaaaaa
attgaggctactaccaagcggttagagattctcgaactcttaacccagttcttgctcgtt
gttgccaagagagatacggccacggacactaaagggtctatgcttctcaaagtggtctat
ctttgtatcaacagactatgccccgactatatgggtatcgagcttggtattggggaatca
ttattggtcaaggccattgcagagagcacagggcgggccatgcccaagatcaaagaagac
ttaaagaaggaaggagacctcggaaaggttgccatgaattctagaaacactcaatcaacc
atgttcaagcccaaagccctgacggtaccatatgtcttccaatgtctcactgagattgca
aaggctaccgggaacgcgtctcaagcgaagaaagtaggcatcatcaaaaaactccttgct
gcctgccagggtaccgaggcgaaattcatcatccgatctctcgaaggaaagttacgaatc
ggtcttgccgacaaaacggtcgtggttgccttggcccacgctatcgttttgaagaccatc
ggtgacaaaaagccatcgcctgagaaacttgccattatgctggaacaaggcgctgaaact
gttaaagctgtctatagtgaacttccttcatatgacttagtaattcctgctctcctccag
gatggcgtagaaggtttgaggaaacattgtaaacttactccaggcgtccctctcaaacct
atgcttgccaagccgacgaaagccatcacagaggttcttgaccgtttcgaaggcaaggaa
ttcacttgcgagtacaaatatgacggagagcgtgctcaagtccacctgttggaagatggt
accatttctgtgttcagcaggaattcagaaaacatgagtgccaagtatcctgatctggta
gatcaaataccgaaggctttgaaacctactgcgaagacgtttgtcatcgatgccgaagcg
gtcgcttatgacttggaaaccaagaagattctgcccttccaggatctcagtaggcgaaag
cgaaaggacgtcaaggccgaagacatcacagtgcgagtacatatctttgcgttcgatttg
ctctatctgaatggagagagtctcctcgctaaagagctcaaagaaagacgacgactctta
caagagcacttccaacctgtggaatcggagtttgcctttgccaagtcgtcagatggcagc
acgtcagaggaaattcaggcgttccttgaggaaagcgtgaaggatgggtgtgagggtctg
atggtgaagatgctcactagtggggcatcaacgtatgagcccagtagaagaagtatgaat
tggctcaagctcaagaaagactacctttcaggtgttggagactctctcgatcttgttgtg
gtaggggcatatcatggcaaaggcaaacgtacagcagtctatggtgctttcctcctcgca
tgctatgaccccgattcggagcattaccagactatctgcaagattggtactggtttctcc
gaagaaatcctcgcgcaattctacgaattacttaaaccattggaattgggagtggtgaga
ggagatatagaggttggaggagccaagccggatgtatggtttgagcccagagtggtctgg
gaggtcttgacggccgatttgagtttaagtccggtttatgcggcggcgcatggtgtaatc
gattcgcgaggaatctcgctccgtttccctcgatttatcaggatcagagatgacaaatct
gctgacgaagccacaacagctgagcaggtcagcgaattctatcaacgtcaggtttcggca
ggtggcaagaaagggccgggggcggatgtggatgacttctggtaa

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