Cryptococcus bacillisporus: 91984346
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Entry
91984346 CDS
T11001
Symbol
I312_104301
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
91984346 (I312_104301)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbas03019
]
91984346 (I312_104301)
03041 Spliceosome [BR:
cbas03041
]
91984346 (I312_104301)
Messenger RNA biogenesis [BR:
cbas03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
91984346 (I312_104301)
Spliceosome [BR:
cbas03041
]
Complex B
Other components
Prp19-related factors
91984346 (I312_104301)
Complex C
91984346 (I312_104301)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_19
TPR_2
TPR_12
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
91984346
NCBI-ProteinID:
XP_066608206
LinkDB
All DBs
Position
7:complement(join(336364..336719,336778..337495,337542..337620,337669..338822,338875..339663))
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AA seq
1031 aa
AA seq
DB search
MASTSLVDTLTSYFPLTLPIPTPITHPHLIPPADLPVEEDLLHNPENLRSWLSYIHNVKE
KIAADEPAKSGVISPEEEILGPLASKNARDGLQRLVSIYERAIAVFPTSYKLWKAYYLTR
QSYVLGELTHDAKEARSQQAKRGAAYKTNVRELLDGAEEAHEWTGGLDPVVGYAEWRSLI
AAGERMIMCLPNLPIPWLLHLGVLLHPKCPSVFKNGSYARRTFDRALRTLPPSIHGRVWG
LYLRWAEVIGGDAGERVWRRYLKVDPSLTERHITYLLEADEPRPLAAAKYLLSIARRAQQ
NLYSSLEGKSPYQLFVDFLELVEKYADQIGMDEEETLELQKTKRAVEEKIDGEKPPVGEQ
EQQSQDEPASVNGRLMRIAGPPVPLEQGKLFKPTNAASAQAPTQLTYDEDTDPSNSRLLD
VEGIVERDGLQVYRDQAGRLWTGLATYWIKKGEFERASATFEKGLAAVVTIRDFTQIFDA
YAEFSETMISTLMDALADEDNLEDEDFDAEETEQELDERMKSFEELMDRRPFLVNDVLLR
RNPNEVVEWEKRIALHGDDDAKVVETYVKALDIINPRKATGPFYPLYVNFAKFYEEGGSK
DDNGEPKNEPDLKQARKIFERAVKVPFKAVDELAEVWCEWAEMELRNENYEEAIRLMQRA
TTVPKNTKINYYDDNIPPQSRLFKSLKLWSYYSDLEESIGTVESTKAVYDKIMELKIANA
QVIVNYATFLEENKYFEESFKVYERGIELFHFPIAFEIWNIYLSKFVKRYGGKKLERARD
LFEQALENCPEKFCKPLYLMYAKLEEEHGLAKRAMGIYDRAASTVQDSDKFEMYTIYIAK
ATANFGLPATRPIYERALESLPDKQTAEMCRRFARMERKLGEIDRARAIYAHASQFCDPR
IEPEFWQEWNDFEIDTGSEDTFREMLRIKRAVQASFNTETSFIAAQAAAASKGTEKPTDA
SAQEAQEAADPMAAMERELNTVSADGARKGGAPAFVASTLNKTNANGIDEGGKEAGEVAN
PDAIVMDEDEF
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcatccacatccctcgtagacacccttacgtcctacttcccactcacgctccccatc
cccacccccatcacccatccacacctcatccctcccgcagacctccctgtcgaagaagac
ctcctgcacaacccggaaaacctccgttcatggctttcctacatccacaacgttaaggaa
aaaattgctgccgatgagcctgccaagagtggcgtgatttccccggaggaagagatcctt
gggccattggcgagcaagaatgcgcgagacggattgcagcgattggtatcaatctacgag
cgagccatcgccgttttcccaaccagctacaagctctggaaagcgtattaccttacccgc
caatcctacgtgctaggggaacttactcatgatgccaaagaagcgcgatctcagcaggcc
aagcgcggtgccgcgtacaagaccaacgttcgagagctcttagacggagccgaagaagcc
cacgagtggacaggtggtcttgaccccgtggtcggttatgccgaatggaggagcttgatt
gcggctggtgaaaggatgatcatgtgtcttcccaacttgccaattccatggcttcttcat
ttgggcgtcttgttgcatcctaaatgtccttctgttttcaagaacggctcgtacgcgagg
aggacgtttgatagggcgttgaggacattgcctcccagtattcacggaagggtctggggc
ctgtatctccgctgggccgaggttattggcggagacgctggtgagagagtctggagaagg
tacctcaaggtcgatccgagcttaacagaacgacacatcacctatctcctcgaagctgat
gagcctcgtcctctcgcggctgccaaataccttctttccatcgctcgtcgtgctcaacaa
aatctctactcttctctggaaggcaaatctccttaccaactgtttgtcgactttttggag
ctcgtggaaaagtatgccgatcagatcggtatggacgaagaggaaacacttgagttgcaa
aagacaaaacgtgcagtggaggaaaagattgacggggagaagccgccggttggagaacag
gagcagcagtctcaggatgagcctgctagcgtcaatggccgtctgatgcgcattgcagga
ccccctgtcccacttgagcaagggaaactcttcaaacctaccaatgccgcatcagcacaa
gctcccactcaattgacctacgatgaagataccgatccatcaaactctcgactacttgat
gtggaaggtatcgtcgagagagatggtctccaggtctatagggaccaagctggtcgattg
tggaccggtttggctacctattggattaagaaaggagaatttgaaagggcttctgcgacg
tttgagaagggtcttgcagctgtggtgactattcgagacttcacccagattttcgacgcc
tacgctgaattctcggagaccatgatctccacactcatggacgctcttgctgacgaggat
aaccttgaagatgaagactttgatgcagaagagactgaacaggagttggatgagcgaatg
aagagtttcgaggagttaatggaccgccgaccattccttgtcaacgatgtgctcctccgt
cgaaacccgaacgaagttgtagagtgggaaaagcgtatcgcccttcatggcgatgatgac
gccaaagtcgttgaaacatatgtcaaggcactcgatattatcaacccccgaaaggccacc
gggcctttctaccccttgtatgtcaactttgccaagttctatgaagaaggaggaagcaag
gacgacaatggtgagccaaagaatgagcctgatttgaagcaagcgaggaagatctttgag
cgggcggtcaaagtgcctttcaaggccgttgatgaattagcagaggtttggtgcgagtgg
gctgagatggagttgagaaatgagaactacgaggaagcgattcgattgatgcagcgggcg
acaactgtccccaaaaacacgaaaatcaactattacgacgataacatccctccccaatct
cggcttttcaagtccctcaaactatggtcctactattctgaccttgaagagtctattggg
accgtcgaatcaaccaaggcagtgtacgacaagattatggagttgaaaatcgccaacgcc
caagtcattgtcaattatgccacgttcttggaagagaacaagtactttgaggaaagtttc
aaggtgtacgaacggggaatcgaattgttccacttccccatcgctttcgagatctggaat
atttacctctccaagtttgttaagcgttacggcggcaagaaactcgaacgtgcacgagac
ctatttgaacaagccctcgaaaactgccctgaaaagttctgcaagcctctctacctcatg
tacgccaagctagaggaagagcacggtcttgccaagcgcgcaatgggtatctacgaccgt
gctgcatcaaccgttcaagattccgacaagttcgagatgtacaccatctacatcgccaaa
gctactgccaactttggtcttcctgccacacgaccaatttacgagcgggccctcgaatct
ttgcccgacaagcagactgcggaaatgtgtcgacgattcgcgagaatggagaggaagttg
ggtgagattgatagagcaagggcgatctatgcgcatgcgagccaattctgtgatcccaga
attgagcccgaattctggcaagaatggaatgacttcgagatcgacactggatctgaagat
acattccgagaaatgctccgtatcaaacgagccgtccaggcgtctttcaacaccgagaca
tcgttcattgctgcccaggctgctgccgcgtccaaaggtactgagaagcctactgatgct
tcagctcaggaagcccaggaggcggccgatcctatggctgcgatggagcgtgaattgaac
accgttagtgctgatggcgcaagaaagggtggagcaccggcttttgttgcgagtacatta
aacaagaccaatgccaacggaattgatgaaggggggaaagaagcaggcgaagttgcgaac
cctgatgcgatcgtcatggatgaggatgagttctaa
DBGET
integrated database retrieval system
