KEGG   Cryptococcus bacillisporus: 91984578
Entry
91984578          CDS       T11001                                 
Symbol
I312_104533
Name
(RefSeq) uncharacterized protein
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
cbas  Cryptococcus bacillisporus
Pathway
cbas03008  Ribosome biogenesis in eukaryotes
cbas03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cbas00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    91984578 (I312_104533)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    91984578 (I312_104533)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cbas03019]
    91984578 (I312_104533)
   03009 Ribosome biogenesis [BR:cbas03009]
    91984578 (I312_104533)
   03016 Transfer RNA biogenesis [BR:cbas03016]
    91984578 (I312_104533)
   03036 Chromosome and associated proteins [BR:cbas03036]
    91984578 (I312_104533)
Messenger RNA biogenesis [BR:cbas03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     91984578 (I312_104533)
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     91984578 (I312_104533)
Ribosome biogenesis [BR:cbas03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    91984578 (I312_104533)
Transfer RNA biogenesis [BR:cbas03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    91984578 (I312_104533)
Chromosome and associated proteins [BR:cbas03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    91984578 (I312_104533)
SSDB
Motif
Pfam: XRN_N XRN_M XRN1_D1 XRN1_D2_D3 SH3_12
Other DBs
NCBI-GeneID: 91984578
NCBI-ProteinID: XP_066608436
LinkDB
Position
7:complement(join(913244..914284,914345..914821,914872..915009,915064..915182,915233..915871,915927..916071,916128..916249,916305..916458,916512..916600,916649..916948,916996..917175,917225..917469,917515..917714,917759..917868,917919..918222,918270..918279,918328..918410,918469..918479,918527..918530))
AA seq 1456 aa
MGIPKFFRWISERYPLTSQLITPNSIPTFDNLYLDMNGIIHNCSHPPSSENDPHFRITEE
QMILAIFAYIDHLFTKIKPQKVFFMAIDGVAPRAKMNQQRSRRFRAGKDARDQREKAEKN
GEKLPDEKAFDSNAITPGTPFMARLSQHLKYYVRKRISEDADWRNIRVILSGHDVPGEGE
HKIQEFIRLNKAQPDYNPNTRHCLYGLDADLIMLGLLSHDPHFCLLREEVTFGRKSRQNT
ELVNTNFFLLHLSLMREYLDLEFSSLQTQISFEYDLERIIDDFILMAIFVGNDFLPHLPD
LHINEGALERIWGMYKDILPTIDGYLNEHGTISLPRLQLLLDKLAEFEVKRFEDDLVDQV
HFAGNHTRDTMVIEKARKKGRKVITKYQQKVLNQLRSFIEKQQNQPNPTHRLELINTQDK
RDNAFVQELADELHLHTTWDEVDDYGQSLIVCTFNMEGVSQDGSADGNEEDEDWESDGME
DEVVDTYPEDVEKSMDEKLKEAMDGIKRQYYHDKLEINYSDPAQMQDLVHHYIEGLQWIL
NYYYKGVSSWGWFYKYHYSPRITDLKGVADMKFEFDYGKPFTPFQQLMGVLPVDSMEHVP
LAYRDLMYEETSPIIDFYPRNFELDMNGKKQDWEAVVKIPFIDQNRLLKAMAARDVRLTP
EERERNKSGVLSTEFVYDPEIDENYPSSFPGVFPELIRSHCRASPFNLPVLGGDIQLIFG
LVEGVQLGVSALAGFPSLDTLPHNGTLDYHGVNVFQSESKNPSMVITIIGKDELPKTSEI
ARKVLGQRTFHSWPYLQEGIVAAVSDDMFKYTLQQVGKSLRVVHAPHQDAVKWRRQADHV
ERHYSRRYGVIIGGVEVLLHIRPLKGLKHLDNGALVKDYEAPEKEIVQAYQMAVSQVTFE
DERFLERAPPDLKIDFPVGERVLFLGDMHYGLAAQVSAINEEAQTLSVILAYFEEETEET
FKFTKAVAHRPTGKWWPSPILCRRLGISALALSRITSTLLVQLNDGSKTNIGLSLKFESR
GLKVLGYSKRNDRGWEFSEKTAQVLEAYKMAFPEVFKHLENRGGDLVKSKELCPTAEDPD
AVIKGMKKWLKDEGLNDLESVSLFADQLEAETCQIIEKLADDILSKKTFQSIKKKRLDNV
PRQTLLKPSQAIYRLQGQVFEPGHRVVMVQDPAAGGVPTGMRGVVVGLGMRTIDVIWDNG
FMGGSTLQGKCSPYRGSTVPFSSCLNLTRPQFTVSERAGPKPVPQNVFRPQLGPRPAVPM
QHYQPSVPGRQQTAITTPHILHKPKTVHSVQSTTVVGSNGHLKYSGVAKGVRPQPIQQQP
VSHRDQLSNLLGGLRLGTGPVVNDSGGSGHITQAQAQGNLPMVHSHASAHQSVSTHPHIQ
GKTSNMNNKPSLSAARGRGAANGVPFPHRGAHNGVPAFAHGSAPNGAPRGRGGRGGGHRG
RGRGRGNGGSSAAIQE
NT seq 4371 nt   +upstreamnt  +downstreamnt
atgggtatcccaaagtttttcaggtggatctcagagaggtatcctcttacctcccagttg
atcacacccaactctatccccacattcgataatctctatctggatatgaacggcatcatt
cataactgctcccaccccccgtcgtctgagaacgacccgcattttcgaatcaccgaagag
cagatgattctggccattttcgcctatatcgaccatctgttcaccaagataaagcctcaa
aaagtatttttcatggctattgatggtgtagctcctcgagcaaagatgaatcagcagcgt
agccgaaggttcagggccggtaaggatgctagagaccaaagggaaaaggcggaaaagaat
ggagagaagctgcctgatgaaaaggcatttgactctaatgcaattacgccaggtacacct
ttcatggcgaggctgtcgcaacacctcaagtactatgtgcgaaaaagaatttctgaagac
gctgattggcgtaacatcagagttattcttagtggtcacgatgtccccggagagggtgaa
cacaagatccaagaattcatccgactgaacaaggctcagccggattacaaccctaacacc
aggcattgcctttatggacttgatgccgatttgatcatgttgggtctattgagtcatgac
ccccatttctgtcttttgcgtgaggaagtgacgtttgggcgaaagtctagacagaacact
gaactcgtgaacaccaattttttcctactccatctttccctcatgcgagaatatctcgac
cttgagttctcatctctccagacgcagatctccttcgagtacgatctggaacgtattatt
gatgattttatcctgatggcaatctttgttgggaatgatttcctgcctcatttgccggat
ttacatatcaacgaaggtgccttggaaagaatttgggggatgtataaagacattttgcct
acaattgacggatatcttaatgagcatggcacgatctcattgccaagactccaacttcta
cttgacaaattagccgaatttgaggtcaagaggttcgaagatgaccttgtggatcaggtt
cactttgctggtaaccacactagagacactatggtgattgagaaggctagaaagaagggc
cgcaaggtcataaccaaatatcaacaaaaagtactgaaccagctgcgcagctttatcgag
aagcagcaaaatcagcccaaccccactcaccgacttgagcttatcaacactcaggacaag
cgcgacaacgcttttgtccaagagcttgcagatgagttacacctgcacacgacatgggac
gaagtcgacgattacggtcaatccttgattgtctgcactttcaacatggaaggtgtgagt
caagatggaagtgcggacgggaacgaggaagatgaagattgggaaagcgatggcatggag
gatgaagtcgtcgatacttatccggaagatgttgagaagtcgatggacgagaagctgaag
gaagccatggatggtataaagaggcagtattatcacgataaacttgagatcaattacagc
gacccagctcaaatgcaggaccttgtacaccactatatcgaaggacttcaatggatcctc
aattattactacaagggtgtttccagttggggctggttttacaaatatcactactctccc
cgtatcactgatttgaagggcgttgccgatatgaagttcgagtttgactatggcaaaccg
ttcactcctttccaacaacttatgggtgtgttgcctgtagatagtatggagcatgttcca
ttagcgtatagggacctcatgtacgaagagacctccccgattatcgacttctatccccgc
aactttgaattggacatgaacggcaagaaacaagattgggaggccgtggtaaagatcccg
ttcattgatcaaaacagattgttgaaggccatggctgctcgtgacgttcgcctcactccc
gaggagagagagaggaataagagcggcgtgctcagtactgaatttgtttacgatcccgaa
atcgacgaaaattacccctcatcgttccccggtgttttccctgagctcattcggagccat
tgccgtgcttccccatttaatctcccagttcttggaggcgacatccaactcatttttggt
ctcgttgaaggtgttcaacttggagtttctgcacttgctggcttcccgtctctcgacact
cttccccacaatggcacccttgactaccatggtgtcaatgtcttccagtctgaaagcaag
aatccttctatggtgatcaccattatcggcaaggatgaactccctaagacttctgagata
gctcgaaaggtcctcggccaaaggactttccactcttggccttatctgcaggaaggtatc
gtcgctgctgtttcagacgatatgttcaaatacaccttgcagcaagttggcaaatctctt
cgagttgtacatgcgccccaccaggatgcggtcaagtggaggcgacaggcagaccatgtg
gaaaggcattattcaaggaggtacggtgtcattattgggggtgtggaagtactgttgcat
atcagaccgcttaagggcttgaaacaccttgacaacggtgcacttgtcaaagactacgaa
gcaccggaaaaggaaattgttcaagcatatcagatggctgtttcacaggtcactttcgaa
gatgaacgtttcctggaacgagctccacctgacttgaagattgacttccctgttggagaa
agagttcttttcctcggcgacatgcactacggtctcgcagcgcaggtctcggcgatcaat
gaggaagctcagacgttaagcgtgattctggcatactttgaagaggaaacggaggaaacc
ttcaaattcacgaaggctgtcgctcaccgaccaacgggcaagtggtggccttcaccaatt
ctgtgccgtcggcttggtatctccgccctcgctctttctcgcatcacatctactttgctc
gttcagcttaatgatggctcaaagaccaacattggactttctctcaagttcgaatctcgc
ggattgaaagttctcggttactcgaagagaaatgaccgaggctgggagttcagcgagaag
actgctcaagtactggaggcgtacaagatggctttccctgaggtgttcaagcatctggaa
aacaggggaggagacctggtcaaaagcaaagaactgtgccccactgcggaggaccctgat
gctgttattaagggcatgaaaaagtggttgaaggatgaaggattgaacgacttggagtca
gtgtcgttatttgccgaccagcttgaagcggagacctgccagataatcgaaaaacttgcc
gacgacattttgtcgaagaaaacctttcaatcaattaagaaaaagcgtttggacaatgtt
cctcgccagactctattgaagccctctcaagccatttatcgacttcagggtcaagttttc
gaacctggccaccgagtcgttatggtgcaagaccccgctgcaggaggcgtgccgactggt
atgaggggtgttgtggtcggtcttggaatgaggaccatcgatgtaatctgggacaatggt
ttcatgggtggctctactctccaggggaagtgttcgccttaccgtgggtcgactgtgcca
ttctcatcctgcctcaacttaactcgtccccaattcaccgtctctgagagagcggggccg
aagcccgttcctcaaaatgtctttcgacctcaacttgggccccgccctgctgtgcccatg
cagcattaccagccttcagtgcctggccgtcaacaaactgcgataactacacctcacatc
ctgcataaacccaagactgtccactccgttcaaagtaccaccgttgttggtagcaacggc
catctgaagtatagcggcgtggcgaaaggtgtccgacctcagccgattcagcaacagccc
gttagtcaccgagatcaattatccaacttgctgggaggtttgcgattgggaaccggccca
gtggtcaatgacagtggtggttccggtcacatcactcaggctcaagctcagggaaacctt
ccaatggtccattcccatgcttctgctcaccagtcggtatccacccacccccatattcag
ggaaaaacatcaaacatgaacaacaagcccagtctcagtgccgccaggggaagaggcgcc
gccaacggtgtacccttccctcatcgaggtgcgcacaatggtgttcctgcgtttgctcac
ggaagcgctccaaacggtgcaccaagggggagaggggggagagggggtggtcacagagga
agaggcaggggccgtggaaatggtggtagtagtgcagcaatccaggagtag

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