Cryptococcus bacillisporus: 91985446
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Entry
91985446 CDS
T11001
Symbol
I312_105401
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
cbas Cryptococcus bacillisporus
Pathway
cbas03030
DNA replication
cbas03410
Base excision repair
cbas03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
91985446 (I312_105401)
03410 Base excision repair
91985446 (I312_105401)
03420 Nucleotide excision repair
91985446 (I312_105401)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbas03032
]
91985446 (I312_105401)
03400 DNA repair and recombination proteins [BR:
cbas03400
]
91985446 (I312_105401)
Enzymes [BR:
cbas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
91985446 (I312_105401)
DNA replication proteins [BR:
cbas03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
91985446 (I312_105401)
DNA repair and recombination proteins [BR:
cbas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
91985446 (I312_105401)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Zn_ribbon_RPB9
NAPRTase_C
Motif
Other DBs
NCBI-GeneID:
91985446
NCBI-ProteinID:
XP_066609295
LinkDB
All DBs
Position
9:complement(join(589402..589466,589525..589651,589714..589803,589853..591367,591417..594539,594595..594780,594829..595120,595184..595389,595451..595755,595818..596127,596197..596292,596345..596470,596565..596849))
Genome browser
AA seq
2241 aa
AA seq
DB search
MSSRGLFRGRGRGSGSGSNTRFTGKRRGRGGGVAYGIDRPPAANQVAREDGTAATEKFEE
VKAYDEIDEKIGFWRFESVRAEGEQKVGWLVNMHQTLMQSDAHPGGLAAVDYYFIQDDGG
SFKVSIPHEPYFYLTCRGGTESIVEEWLLKRYEGIIIRIEREKKWDLNLPNHLLSAPPVF
LKLFFHNTADLHTIRRDLLPLARSNSEKFTAVDAYADVVSAEAAANGHGDDESKAWGAED
DIRKKKDKEPSECIIEVREHDLAYHLRVAIDLNIRVGLWYTVTSRTGVITLERIPDRVKR
ADPVVMAYDIETTKQPLKFPDQQTDQIMMISYMIDGMGYLITNREIVGEDIDDFEYTPKD
EYPGEFTVFNEPDEPAVIRRWFEHIRDSKPTVIATYNGDSFDFPFVDARAKIHGISMYEE
IGFKPDIEDEYKSRSTMHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPIELDPELMTP
YAIEQPQILAQYSVSDAVATYYLYMKYVHPFIFSLCNIIPLSPDEVLRKGTGTLCETLLM
VEAYDAHIIMPNRHEDPHGVTYEGHLLASETYVGGHVEALEAGVFRSDIPTHFKIVPNAI
QGLIDDLDAALQFSLIEEGQVKLEDVENYDEIKQQIQTALETMRDEPNRFDNPLIYHLDV
AAMYPNIMLSNRLQPDSVKEEADCAVCDYNRPDKKCDRRMEWAWRGEYFPAKRDEVNMVR
YALEQEIFPPKRPYDPKRRFVDLSPAEQSALLHKRLGDYSRKVYKKTHETKIVTKTTIIC
QRENSFYIDTVRAFRDRRYEYKGLHKTWKKNLDKAFEEGGAVAAVDEAKKMIVLYDSLQL
AHKCILNSFYGYVMRKGARWYSMEMAGITCLTGATIIQMARQLVEQIGRPLELDTDGIWC
MLPGVFPEDFNFKLKNGKKFGISYPCTMLNHLVHAQFTNDQYHELVDSDSGTYNVKKENS
IFFELDGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGFEVKRRGELQMIKIFQSQ
IFDKFLLGKTTEECYAAVATVADQWLDILQSKASSLHDDELVDLIAENRSMSKTLAEYAG
QKSTSISTARRLAEFLGKQMVKDKGLSCRFIISAKPNGAPVTERAVPVAIFTAEEPVKRH
YLRKWLKDNSLTDFDLRTILDWEYYTERLGSVIQKLITIPAALQKVPNPVPRIRHPDWLY
KRIATKEDKFQQHKITDIFTKLKDMEDFGDGQKKVGPKLAVVRKRNKKEQEKEPEVEEVP
PNPEGDYAGYIRVMKKKWRKQRHEKARARKSGFRQDGTISSMLRTQTSTMNSKQWDVIQI
ASTNRPGEFKLWLAIDGTFQSVRLIVPREFYLNFKKDPDPQLLATDRYEAVEVVRTLPRG
QPARHLYKLSVDEVLFMEGESHFSTLINNPNVDGAFELQVPLVVRALLTFGTSCALRSNI
LGGLNRGLDKGFDLVDLERSGNLSRHKYLNEGRQIRYHFLFHAVSDQRHIIGLFSPDSTN
ASIYLVDRAKNRQQLPNPLKFYTDRMERAESGVFSYRDMLDFTTTYHPSESSAFKALGKD
LQAINRGLNVIALCSPFEHSYYQAKGPVYSNFPFITYRLGKEEDPGLMWLLQTSRRMIGL
YLRLSSWLKEQIEIASHFDVPIGNLGADTAVFLADIEFARRLKQQDMLIWWSSTPRPDLG
GSEEDANSSEDLVSPHISNRGCYSSTVLELEVSDLAINAVLQSALVNEMEGSGTGSLAFD
SASHSLDEYAKGAVNAPVMLGDAVLSAQTFGILKSMLRALYADKARAHVKGNSVSPAEIV
VDQFWRWISSSTSSMFEPALHRFLHGLMRKTFLQLLAEFKRLGTQVVYADFGRIFLLTSK
PDAGSAFAFAKYLVAAANSQELFRHLIIDVVQFWNYLAWMDVANFGGVKVSPETAASREP
PAKRFEISMDWNIQSFLPATLQPVFERNVASFIFSLYSAKRSSNDGREPLRVVHSLNIDQ
PGTEATSTVNPVKEKEKKAASKSISQTLTRRLLFDIAGVKRQQAAVHLEPEEAYTLAFPD
LPGARSKRTNPTLELIKAITEVYSLASEHSIQVQILKRNLLDLIGVKEFSSDAAFVPPCD
SIEVPMVICKRCNAIRDVDLCRDPDRLPSVDPDSGDMLEPARKSWVCHKCDSEYGRFQIE
QPLIEMITKTITNYQIQDVICLKCSQTKSDNLAATCKCGGGFRTMSNRNELKTKLKMIKS
VCDYHKLPFAGSYVEETLSRW
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccagaggattattcagaggacgcggtcggggatccggatccggaagtaacacc
cgattcactggtaagcgacgaggtcgtggtggcggggtcgcatacggtatcgaccggccc
cctgcagctaatcaagttgcgcgtgaagatggaactgccgctactgaaaagtttgaagag
gtcaaggcgtacgatgagattgatgagaagattggattctggagatttgagagtgtgaga
gcagaaggcgaacaaaaagttgggtggttggtcaacatgcaccagaccctaatgcagagc
gacgcgcaccctggaggtttagcagctgtggattattattttattcaagatgacggagga
tccttcaaggtgtcaatacctcacgagccgtatttctatcttacttgccgggggggaacg
gagagtatcgtcgaagaatggcttttgaaacgatatgaaggtatcataataaggatagaa
agagaaaagaagtgggatttaaatctcccaaaccatctgttatcggcacccccagtgttc
cttaaactgttcttccacaatactgcggatctccacactatccgacgtgacttactacct
cttgcacgcagcaactctgaaaaattcacggccgttgatgcttatgccgatgtggtcagt
gcagaggctgcagccaatggtcatggggatgatgagagtaaagcatggggcgcggaagat
gatatcaggaagaagaaggataaagaaccgtcagagtgtatcattgaagtccgagaacat
gacttggcgtaccatttacgagtggcaattgatcttaacattcgtgttgggctatggtat
acggttacctctcgcaccggcgtgatcactctggaacgaataccggatcgtgtcaagcgt
gctgatccagttgttatggcctatgatatcgaaacaacaaagcagccactcaagttcccg
gatcaacaaacggatcaaatcatgatgatttcttacatgattgacgggatgggctatttg
atcaccaatagggagattgtgggtgaagacattgacgattttgagtatacaccaaaggat
gagtacccaggtgaattcacagtgttcaatgagcctgacgagcctgcggtcatccgaaga
tggttcgagcatatcagagattccaagccgaccgtcatcgcaacgtataacggtgacagt
ttcgatttcccttttgttgatgcaagggccaagatacacggaatcagcatgtacgaggaa
attggatttaagccagatatcgaggacgagtataagtcccgatcaaccatgcacatggat
tgtttcagatgggtcaaacgagactcttatcttccacaaggtagtcaaggcctcaaagct
gtgactactgccaagctcggttacaaccccattgaactcgacccagaattaatgacgccg
tacgccatcgagcaaccccaaatattagcccaatattccgtttcggatgcggtcgccaca
tactatctctacatgaaatacgttcaccccttcatcttttcgctgtgtaatatcatcccc
ttaagtccggatgaagtcttgcgtaaaggaacaggtactctctgtgaaacgttactgatg
gttgaagcttatgatgctcatatcattatgcctaaccgtcacgaagatccccacggagtc
acctacgagggccacctactcgcgtctgaaacatatgtcggaggacacgttgaggctctg
gaagctggtgtgtttaggagcgacatcccgacccacttcaagattgtgccaaatgccata
caaggacttatcgatgatcttgacgcggcacttcaattctccttgattgaagaaggtcaa
gtcaagctcgaggatgtcgaaaattacgacgagatcaaacagcaaatccagactgctctc
gagaccatgcgggacgaacccaatcgcttcgacaaccctttgatctatcatcttgatgtc
gccgccatgtaccccaacatcatgttgtcaaatcgtctacagcccgattcagtcaaagag
gaagcagattgtgcagtgtgcgactacaatcggcctgacaagaagtgtgataggcgtatg
gaatgggcatggagaggagaatacttccccgcgaaaagagacgaagtcaacatggtacgg
tatgctctggaacaggaaatattccccccaaaacgtccatatgacccaaaacgccgtttt
gtcgacttatcgcccgcagaacaatctgctcttcttcacaagcgtttaggcgactattct
cggaaggtatacaagaagactcacgagacaaagatcgttaccaaaacaactataatttgc
cagcgagagaattcgttctatattgacactgtcagggcgttccgagatcgtcgttacgag
tacaagggtctacacaaaacctggaagaaaaacctcgataaggcatttgaagaaggtgga
gcggttgcggcagtagatgaggccaagaagatgattgtgctctacgactcgcttcaactt
gcccacaagtgtatcctcaactctttctatggttatgtcatgcgaaaaggagcgagatgg
tattcaatggagatggcaggcatcacttgtctgactggtgccacaattatccagatggca
aggcagcttgttgagcagatcgggcggccgttagagctggatacagacggtatctggtgc
atgttgcctggtgttttccctgaagacttcaatttcaaactcaagaatggcaagaaattt
ggcatctcgtatccttgcaccatgcttaaccaccttgtccacgcgcagttcaccaatgac
cagtatcacgaacttgttgacagtgactctggtacatacaatgtcaagaaagaaaactca
attttcttcgaactggatggaccttataaagctatgattcttccgtcttcaaaagaagag
gacaagttgcttaagaagagatatgccgtcttcaaccccgatggctctcttgcggagctg
aaaggattcgaagtgaagcgtcgaggtgaacttcaaatgatcaagatcttccaaagccaa
atctttgacaagttcttgcttggtaagacaaccgaggagtgctacgctgccgtcgccacc
gttgccgatcaatggctggatatccttcaaagcaaggcctcaagtcttcatgatgatgaa
ctggtcgacttgattgctgagaaccgtagcatgtcaaaaacgcttgcggagtacgctggt
caaaagtctacttcgattagcactgcaaggaggttggcggaatttttgggcaagcaaatg
gtcaaggacaaaggtctttcttgtcgatttatcatctctgcgaaacctaacggtgcgcca
gtcacagaacgagctgttcccgttgcaatcttcacagctgaagagcccgtgaaaaggcac
tatcttcgtaaatggctaaaggataacagccttacagacttcgatcttcgtacgattctc
gactgggaatattatactgaacgtcttggttccgttattcagaagctcatcaccattccc
gcggcacttcaaaaagtaccaaaccctgtacctcgtatccgacacccagactggctttat
aaacgtattgccaccaaagaagacaagttccaacagcacaaaataaccgatatattcaca
aagttgaaggatatggaagattttggagacggacagaagaaagttggaccgaaattggct
gtggttaggaaaagaaataagaaggagcaagagaaggaaccggaggttgaggaagtccca
cccaatcccgaaggtgactatgctgggtacatcagggtaatgaaaaagaagtggcgcaag
caaaggcacgaaaaagctcgagcgcgtaagtctggttttcggcaagatggtactatatcc
tccatgcttcgcacgcagacatctaccatgaattcaaaacaatgggacgttatccagatc
gcctccaccaaccgcccgggagaattcaaactctggcttgccattgatgggacattccaa
agcgtgcgattgatagtaccccgagaattctatcttaacttcaagaaagatcccgaccct
caactgttagctacagaccgttatgaagcggtggaggtcgtcaggacattacctcgagga
cagcctgccagacatctttacaagctgtcagtagatgaagtgctcttcatggaaggagaa
tcgcatttttcgactttgatcaacaacccaaatgtcgacggtgcttttgaactccaagtt
cctcttgtcgttcgcgcactcctcacctttggtacttcatgcgctttgcgctctaatatc
ctcgggggtctcaaccgtggtctggacaagggtttcgacctcgttgacttggaacgctca
ggaaacctgtctagacacaagtatctcaatgaaggtcgccagattaggtaccactttctc
ttccatgccgtttctgaccagcggcatataattggccttttctccccggattctaccaat
gcttctatttaccttgttgatcgagccaagaaccgtcaacaactgcctaatccgttgaag
ttctacaccgatcgaatggagcgtgcagaaagtggtgtcttttcttaccgcgatatgctt
gactttaccactacatatcatccctcggagtcatctgcattcaaggcacttgggaaagat
cttcaagccatcaaccgcggtctcaacgttattgccctctgttcaccatttgagcattcc
tactatcaggcaaaaggaccagtctactccaacttcccgttcataacatacagattgggc
aaagaggaagatccgggtctaatgtggctgttgcagacgtcgaggaggatgattggattg
tacttgaggctgtccagctggttgaaggagcaaatcgaaattgcatctcatttcgatgtt
cctattggcaatctgggtgccgatacggcggtgttcctagcagatatcgagttcgcacgt
agactcaaacagcaagatatgctcatttggtggtcatcgactccccggcctgatcttggt
ggctctgaagaagacgctaactctagcgaagatctggtttctcctcacatctcaaaccgc
ggctgttattcatctaccgtgctggaattggaggtctccgatcttgccatcaacgctgtt
cttcaatcagctctcgtcaatgaaatggaaggttcaggaactggttcgctcgcttttgat
tcggcatcccatagccttgatgagtacgccaagggtgctgtcaacgccccggtcatgctt
ggagatgccgtactttccgctcaaacctttgggattctcaagtcaatgcttcgtgcattg
tatgctgataaggctcgcgctcatgtcaagggtaactcagtgtcccctgccgaaatcgtc
gtcgatcagttttggcgttggatcagttcatcaaccagtagcatgtttgagccagctctt
catcgtttcctccacggtttgatgcgcaaaacattcctgcagctcctcgcagaattcaaa
cgactgggtacccaagtcgtctacgcggatttcggccgtattttccttcttacctccaag
cctgatgctggcagcgcttttgcgtttgcaaaatatctcgtggccgctgccaattcacaa
gagttgttccgccatctcatcatcgacgtcgtccagttttggaactaccttgcatggatg
gatgttgccaatttcggcggcgtcaaagtctcacctgagactgcagcgagtcgagaaccg
ccagcaaaaaggttcgagattagtatggactggaatatccaatcttttttacccgccact
cttcaacctgtgttcgaaagaaatgtagcgagcttcattttttccctttacagtgctaaa
cggtcttccaatgacggcagagagcctcttagagtcgtccacagtctgaacattgatcag
cctggtacagaagctacatcaacagtgaatcctgtcaaggaaaaggagaagaaagctgcc
tccaagagtatctcacagactcttacccgtcgacttctttttgatattgccggggtcaag
cgtcaacaagcagctgtgcaccttgagccagaagaagcctataccctggctttccccgac
ttgcctggagctagatcaaaacgcacgaatcccaccctcgaacttattaaggccatcacg
gaggtctattctctcgcttctgagcatagtatccaagtgcaaattctcaagcgaaactta
ctggatttgattggtgtcaaggagttctcaagcgacgccgcctttgtgcctccatgcgac
agtattgaggtacccatggtgatttgcaaaaggtgtaacgcgatcagagatgtggacctt
tgcagagatcccgacaggttgcctagtgttgacccagatagcggtgatatgttggagcca
gcaagaaagagctgggtgtgtcataaatgtgactctgaatatggtcggttccagatcgaa
caacctcttatcgaaatgatcaccaagacgatcaccaactaccaaatacaagacgtgatc
tgcctcaaatgctctcaaacaaaatcagacaatcttgcggcgacctgcaaatgtggcgga
ggatttagaacgatgtcaaacagaaatgaactgaagacgaagctgaaaatgattaagagt
gtatgtgattaccacaaactgccctttgctggtagttatgtggaagagacattgagtcgg
tggtag
DBGET
integrated database retrieval system
